| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1286 |
|---|
| Symbol | |
|---|
| ID | 5604872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1415512 |
|---|
| End bp | 1416153 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640936818 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001477518 |
|---|
| Protein GI | 157369529 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.172682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACGG CCAGGATCCG TTACTCGAGC CAAGCCATGC CCTCATTGTT ATTAGTTGAT
GACCACCCGG TGGTTCATGT CGCACTGGAA GCGGCGCTAA TCAAGTCTTC CCGCTCCTAT
GTTCTACAGG CGGTAGAGGA TGACGTACAG GCGCTGGCCC AGTTGGCCGC AGCCGACTTT
GCACTGGTGA TCCTCGATAT CGGCCTGCCG CAGGTAGACG GCCTGCAGCT GCTGAAAAAG
ATTCGCCGCC ATTACCCGCA GCAGTCGATC CTGATTTATA CCGCCCAGGA AGAAGAGATT
TATGCCCGTA TGGCCTATGC GGCCGGTGCC AACGGCTTTG TTCACAAGGG CAGCCGACTG
GAACAACTGG TGCTGGCGAT TGAAACCGTG CTGGCCGGGG AACTGAGCTT TCCCGCCGCC
GCGATGGCAG AAGAAACCCA GCCGACAGAA GGCTCGCTGC TGACGCCAAA AGAACTGCAG
ATTCTCGGGC TGCTCAGTAA AGGGTTGTCC AACCTGCAAA TTGCCGAGAT GCTGAGCATC
AGCAACAAAA CCGTCAGCAC CCACAAGAAG AATATTTTGC GCAAGACTGG CGCCAGTAAC
CTGCTGGAGC TGGTGGCGGT GTTTAAAGAG CTGACGCCAT GA
|
|---|
| Protein sequence | MLTARIRYSS QAMPSLLLVD DHPVVHVALE AALIKSSRSY VLQAVEDDVQ ALAQLAAADF
ALVILDIGLP QVDGLQLLKK IRRHYPQQSI LIYTAQEEEI YARMAYAAGA NGFVHKGSRL
EQLVLAIETV LAGELSFPAA AMAEETQPTE GSLLTPKELQ ILGLLSKGLS NLQIAEMLSI
SNKTVSTHKK NILRKTGASN LLELVAVFKE LTP
|
|---|
| |