Gene Spro_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1280 
Symbol 
ID5604788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1407037 
End bp1407552 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID640936807 
Productpeptidoglycan-associated outer membrane lipoprotein 
Protein accessionYP_001477512 
Protein GI157369523 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000137851 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000238774 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACTGA ACAAAGTGCT GAAAGGGCTT CTGCTGGCAC TGCCAGTTCT GGCTGTAGCG 
GCTTGTAGTT CTAACAAAAG CGCAAACAAC GACCAATCTG GTATGGGCGC TGGCGCTGGC
ACTGGTACAG AAAATGGCAG CAGCAACCTG TCTTCTGAAG AACAAGCTCG TCTGCAGATG
CAAGAACTGC AGAAGAACAA CATTGTTTAC TTCGGCCTGG ACAAGTATGA CGTGAGCTCT
GAGTTCGCTC AGATGCTGGA CGCGCACGCT GCATTCCTGC GTAACAACCC GTCTTACAAA
GTGACCGTTG AAGGCCACGC GGATGAACGC GGTACGCCGG AATACAACAT TGCCCTGGGT
GAGCGTCGTT CTAACTCAGT CAAAATGTAC CTGCAAGGTA AAGGCGTTTC TGCTGACCAG
ATCTCTATCG TTTCTTACGG TAAAGAAAAA CCAGCAGTAC TGGGCCACGA CGAAGCGGCT
TATGCTAAAA ACCGTCGTGC AGTTCTGGTT TACTAA
 
Protein sequence
MQLNKVLKGL LLALPVLAVA ACSSNKSANN DQSGMGAGAG TGTENGSSNL SSEEQARLQM 
QELQKNNIVY FGLDKYDVSS EFAQMLDAHA AFLRNNPSYK VTVEGHADER GTPEYNIALG
ERRSNSVKMY LQGKGVSADQ ISIVSYGKEK PAVLGHDEAA YAKNRRAVLV Y