| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1257 |
|---|
| Symbol | |
|---|
| ID | 5604473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1382776 |
|---|
| End bp | 1383513 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640936784 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_001477489 |
|---|
| Protein GI | 157369500 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.187621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.809316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTG ATTTAAATGC CGATCTCGGC GAGGGCTGCG CCAACGATCA GGCGCTGCTG
CAACTGGTCA GCTCGGCCAA TATTGCCTGC GGTTTCCACG CCGGGGATGC GCAAACTATG
CGGCAATCGG TGCGTTGGGC ACTGCAGTAC GGCGTAGCTA TTGGTGCGCA CCCGAGTTTT
CCCGATCGCG AGAACTTTGG CCGTACCCGT ATGCAGCTAC CAGCGGAAAC GGTCTATGCC
CAGGTGGTAT ACCAACTGGG TGCATTGGCC GCGATTGCCC GTGCCGAAGG CGGGGTGATG
GTCCACGTCA AGCCGCACGG CATGCTGTAC AACCAGGCGG CTGTGGAGCC GGAATTGGCG
CAGGCTATCG CCCGGGCGGT TAAAGCGGTC GATCCAACGC TGCGGCTGGT GGGGCTGGCG
GGCAGTGAGC TGATCCGCGC CGGTGAAGAG CAAGGATTGG TAACGCGGCA GGAAGTGTTT
GCCGATCGCG GCTACCAGGC CGACGGCACA TTGGTACCAC GTGGTCAGCC GGGGGCGCTG
ATTACCAGCG ACGAACTGGC ACTGGCGCAA ACGCTGGAAA TGGTGCGTCA TCATCGGGTT
CGTACCCTGA GCGGCACCTG GGCCGCCGTT CAGGCCGAAA CCGTCTGCCT GCACGGCGAC
GGTGAACATG CGCTGGAATA TGCGCGCACG CTGCGCGAAC GTTTTGCCGT GGAAGGCATC
AGCGTCAGCG CTCAGTAA
|
|---|
| Protein sequence | MIVDLNADLG EGCANDQALL QLVSSANIAC GFHAGDAQTM RQSVRWALQY GVAIGAHPSF
PDRENFGRTR MQLPAETVYA QVVYQLGALA AIARAEGGVM VHVKPHGMLY NQAAVEPELA
QAIARAVKAV DPTLRLVGLA GSELIRAGEE QGLVTRQEVF ADRGYQADGT LVPRGQPGAL
ITSDELALAQ TLEMVRHHRV RTLSGTWAAV QAETVCLHGD GEHALEYART LRERFAVEGI
SVSAQ
|
|---|
| |