Gene Spro_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1198 
Symbol 
ID5602902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1313908 
End bp1315194 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content54% 
IMG OID640936719 
ProductD-alanyl-D-alanine carboxypeptidase fraction A 
Protein accessionYP_001477430 
Protein GI157369441 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG GGATCTCATC TGTTATAGTG TGGCTCGTTT TTAATTTTAC CCTCATGGAT 
GTTGTAGTCT CGATCATGAA ACAAGTAACT TCTTTTCGCT TAATCAAGAG CATAGCGCTC
GGCACCGTTA TCGCGATGAG TGCAACCTCC GTTGCGCATG CCGATGACGT TAATATCAAG
ACCATGATCC CAGGGGTACC GCAAATCGAT GCGGAATCCT ACGTCCTGAT TGATTACAAC
TCCGGTAAAG TTTTGGCGGA AATGAACGCC GATGCCCGCC GCGATCCAGC CAGTCTGACC
AAAATGATGA CCAGCTACGT CATCGGCCAG GCGCTGAAAG CAGGTAAAAT CGGCCAGGAA
GACATGGTTA CCGTGGGGCA AGACGCCTGG GCTACCGGCA ACCCGGTATT CAAGGGTTCT
TCGCTGATGT TCCTCAAGCC AGGCGACCGC GTACCGGTCT CCAAGCTGAC CCGCGGCATC
AACCTGCAAT CCGGTAACGA CGCATGCGTG GCGATGGCCG ACTACGTAGC CGGCAGCCAG
GACGCGTTCG TTAACCTGAT GAACACTTAC GTCAGCAAGC TGGGCCTGCA GAATACCCAC
TTCCAGACGG TACACGGCCT GGATGCACAG GGTCAGTACA GTTCGGCGCG CGATATGGCG
TTGATCGGCC AGGCGCTGAT CCGCGACGTG CCGGACGAAT ATGCGATTTA TAAAGAAAAA
GAGTTCACCT TCAACAATAT CCGCCAGATG AACCGTAACG GTCTGCTGTG GGATACCAGC
CTGAACGTGG ACGGCATCAA AACCGGTCAT ACCGATGCGG CAGGCTACAA CCTGGTCGCT
TCCGCGACCG AAGGTCAGAT GCGTCTGATC TCTGCGGTGT TGGGCGGTCG TACTTATAAA
GGCCGTGAAA CCGAGAGCAA GAAACTGCTG ACCTGGGGCT TCCGCTTCTT CGAAACCGTT
GCGCCACTGA AAGTGGGCAA AGAGTTTGCG TCTGAACCCG TCTGGTTCGG CGATGCGGAT
CGCGTTGAGT TGGGCGTAGA CAAAGACGTT TACCTGACCA TCCCACGCGG CCGGATGAAA
GATCTCAAAG CCAGCTACGT GCTGAACACG CCGGAAATTC ATGCACCACT GGCGAAAAAC
CAGGTTGTCG GCAGCATCAA CTTCCAGCTC GATGGCAAAA CCATCGATCA GCGCCCACTG
GTGGTGATGA ACGAAGTGAA AGAAGGCGGT TTCTTCAGCC GTATCGTGGA TTACATCAAA
CTGATGTTCC ATCACTGGTT CGGTTAA
 
Protein sequence
MPAGISSVIV WLVFNFTLMD VVVSIMKQVT SFRLIKSIAL GTVIAMSATS VAHADDVNIK 
TMIPGVPQID AESYVLIDYN SGKVLAEMNA DARRDPASLT KMMTSYVIGQ ALKAGKIGQE
DMVTVGQDAW ATGNPVFKGS SLMFLKPGDR VPVSKLTRGI NLQSGNDACV AMADYVAGSQ
DAFVNLMNTY VSKLGLQNTH FQTVHGLDAQ GQYSSARDMA LIGQALIRDV PDEYAIYKEK
EFTFNNIRQM NRNGLLWDTS LNVDGIKTGH TDAAGYNLVA SATEGQMRLI SAVLGGRTYK
GRETESKKLL TWGFRFFETV APLKVGKEFA SEPVWFGDAD RVELGVDKDV YLTIPRGRMK
DLKASYVLNT PEIHAPLAKN QVVGSINFQL DGKTIDQRPL VVMNEVKEGG FFSRIVDYIK
LMFHHWFG