Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1156 |
Symbol | |
ID | 5603688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1272329 |
End bp | 1273105 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640936676 |
Product | short chain dehydrogenase |
Protein accession | YP_001477388 |
Protein GI | 157369399 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.565879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000930327 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAAG CAGTATTGAT AACCGGCTGT TCCAGCGGGA TTGGATTGAT TGCCGCGCAG GATCTGCGTA ACCGTGGCTA CCGGGTGCTG GCCGCCTGTC GCAAGCCGCA GGACGTTGAA AATATGCGTC AGCTTGGGCT GGAAGGCATT GAGCTGGATC TGGACGACAG TGACAGCGTC GAACGCGCCG CCGCACAGGT GATCGAACTG ACCGGCGGCC GCCTGTATGG CCTGTTCAAC AACGGCGGTT TTGGCGTTTA CGGCCCGCTG AGCAGCATTT CGCGGCAGCA ATTGGAACGC CAATTCGCCA CCAATCTGTT CGGCACCCAT CAATTAACCC AGCTGCTGTT GCCGGCGATG CTGCCGCACG GCGAGGGGCG TATTATTCAG ACCAGTTCGG TTATGGGGCT GGTGTCCAGC GCCGGGCGTG GTGCCTACGC CGCCAGCAAG TTTGCGCTGG AAGCCTGGTC CGACGCGCTG CGGATGGAGC TGCACGGCAC GGGCATTCAG GTCAGCCTGA TTGAACCCGG CCCGCTCACC ACCCACTTTA CCCAGAACGT CAATCAGGCC CAAAGCGACA AACCGGTGCA CAACCCAGGC ATTGCCAAGC GCCTCACACT ACCGCCGGAA GCCATTTTGC CCAAACTGCG CCACGCGCTG GAAAGCCCAA GGGCCAAGCT GCGGTATCCG GTGACCCTGC TGGCGCACGC GCTCAGCGTA TTACGCCGCA TCCTGCCCGG CCGCTGTCTG GACTGGGTGT TACGCAGCAA CGGTTAA
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Protein sequence | MQKAVLITGC SSGIGLIAAQ DLRNRGYRVL AACRKPQDVE NMRQLGLEGI ELDLDDSDSV ERAAAQVIEL TGGRLYGLFN NGGFGVYGPL SSISRQQLER QFATNLFGTH QLTQLLLPAM LPHGEGRIIQ TSSVMGLVSS AGRGAYAASK FALEAWSDAL RMELHGTGIQ VSLIEPGPLT THFTQNVNQA QSDKPVHNPG IAKRLTLPPE AILPKLRHAL ESPRAKLRYP VTLLAHALSV LRRILPGRCL DWVLRSNG
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