Gene Spro_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1130 
Symbol 
ID5607371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1243346 
End bp1246738 
Gene Length3393 bp 
Protein Length1130 aa 
Translation table11 
GC content57% 
IMG OID640936650 
Productpotassium efflux protein KefA 
Protein accessionYP_001477362 
Protein GI157369373 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000811569 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCATCGCA GGTTAGCTAA AGGTTCTTTT CTGGCGTTCC CCTCGTTCCT GAGTGTGGGC 
CTTTCCCGCA CCCTTGCCCT GTTTTTACTG ATCGCGGTTT GTGCGGTGTG CCAACCTGCG
GCTTATGCGT CCCTGAATGG CGACCTGCCG TCCCGTAGCG AAATTCAAAG CCAGATTGAA
GCCTTGAACA AGCAAAAGAC GCTGACCCCG GTCAATAAGC TCACCCAACA AGATTTGGCC
CGCACGCTTG AGCTGCTGGA CGCGATTGAA CGCACCAAAC AGGATGGCGC TCAGCTTAAG
CAGCAGTTGC AACTGGCGCC GGGCAAATTG CGTCAGGTAA CCGCCGATCT CGATGCACTC
AAGACGCCGG TAGACGGCAC GGCCGCCAGG GCCGAACTGC TGCAGCTTTC GCTGCGCCAG
TTGGAAACCC GCCTTTATCA AACCCTCGAC GACCTGCAGA CTGCGCAGGA AAACCTGTCG
ACCTATAACA GCCAGCTGGT TTCACTGCAG ACCCAGCCGG AGCGGGTGCA GAGCAGCATG
TACACCGCTT CGCAGCGTCT GCAGGAGATC CGTAACCAAA TCAACGATCA GACGCCGGGC
CAAAACTCAT TGCGCGACAG CCAGTTAGTG ATGCTGGCAA CCGAACAGAC GTTGCTCAAT
GCGCAAATTG ATCTGCAGCG CAAAAGCCTG GAAGCCAACA CCACCCTGCA AGATTTGCTG
CAGAAACAGC GCGATTACAC CACCGGACAT ATTGATGCTT TGGATCACAA CGTGCAGTTG
CTGCAAGAAG TGGTCAACAG CAAGCGCCTG ACGCTGTCGG AAAAAACTGC CAAAGAGGCG
CAGAACCCGG AAGATGCGAC TGACATTCAG CACGATCAAT TAGTCAGTAA AGAGCTGGAT
GTTAACCGCC AGCTCAGCCA ACGGCTGATT GCCGCCACCG AAGAGAGCAA CGTGTTGTTC
CAGCAGAATA TTCGGGTGAA GAACTGGCTC GATCGTGGCC TGCAGGCAGA ACGTAATCTG
AAAGAACAGA TCCAGGTGCT CAAAGGCAGT CTGGTGCTGT CACGCATTTT GTATCAGCAA
CAACAGAGCC TGCCGCAGGG GACGCTGGTG GCAGACATGG GCACGCGCAT CGCCGATCTG
CGTCTGGAAC AGTTTGATAT CAACCAGCAG CGCGACGACC TGTTCAAAGG CGACGATTAC
ATCAATAAGC TGGTTGCCGA CAGCAAAGAA AAAGCCAGTG CGGACGTGCT GGACGCTTTA
AACGAAATCG TCGATATGCG GCGTGAGCTG CTGGATCAGT TGAACAAGCA GCTTAGCAAT
CAGTTGGCGC AGTCGATCAA CCTGCAGATC AACCAGCAGC AGTTGACCAG CGTTAACAGC
TCGCTGCGGG ATACGCTGAC CCAGCAGATT TTCTGGGTTA ACAGTAACAA ACCGGTTGAT
TTGGCGTGGT TGAAAGCTCT GCCGGGGGCG GTCAGAGATC AGCTCGCCAC ACTCGATTTC
AAATTAGACC TTGGAAAAAT AGTGCAGGGC GGTTTGAATT CGCTGGTGGT GCTGATCCCG
CTGTTGCTGC TGCTCGGCCT GTTACGCTGG CGCTACAAGC TGATCGACAG CCATTTGCAA
CGGCTGGCCA ACGATGTCGG GCAGTTAAAG CGCGATGGCC AACTGCACAC ACCCAAAGCC
ATCTTACTGA CCTTGCTGAA GGTCGTTCCC GGCTCGGCGC TGCTGCTGGG GGCGGGGTTC
TGGGGGGATC GTGCCGAAAT TGGCCTCAGT GATTTCATTT GGGCGCTGTC GCAGCAGCTG
GCGCTATTCT GGCTGATTTT CGGCTTCACC TACCGCATGC TGGCAGTCGG CGGCGTTTGT
GAGCGGCACT TTAATTTTGC CCCTGAGCTT TGTGCGCATT ACCGCCGTCA GACGGTGCGG
TTGGGCCTGG CGCTGCTGCC GTTAATCTTC TGGTCGGTGC TGGGCGAGAA AGCGCCGCTG
CGGCTGGTGG AAGACGTGAT CGGCCAGGTG GTGGTCATGC TGACGCTGGC ACTGCTGACC
GTGCTGGTGT TCCCGATGTG CCGTGACAGT TGGCGAGAGA AAGGTTCGCA CGCGGTGCGA
TTGGTGATTG TTACCGCGAT TGCCGCCACG CCGTTGATCC TGCTTGGGCT GATGTTTGCC
GGTTACTTCT ACACCACGCT GCGGCTGGCT GGCCGCTGGA TCGACAGTCT GTACCTGTTT
TTCCTGTGGA ATATTGTATA TCTGACTGCG ATCCGTGGGC TGAGCGTCGC GGCGCGCCGT
CTGGCTTACC GCCGTGCGCT GGCCCGTCGC CAGAGCCTGG CGAAAGAGAA AGAGGGAGCC
GAAGGGTTGG AACCGGTTGA AGAACCTCCT TTGGCGCTAG ATCAAATCAA CCAGCAGTCG
CTGCGTCTGA CCACCATGGC GCTGTTTATT ATCTTCGCCA GCGCTTTTTA TGCCATTTGG
TCCGATCTGG TGACGGTGAT CTCGTATCTG GACAGCATCA CGCTATGGCA TTACACCTCT
ACCGTTGCCG GCAGCAGCGT GGCGCAGGCG GTAACGCTGG GCAACATGAT GGTAGCGATA
GCGGCGGTTA TCGTCGCCTA CGTCATGACG CGCAACCTGC CTGGTTTACT GGAGGTGGTG
GTGTTGTCGC GGCTGCAGTT GCGGCAGGGC ACCTCTTACG CGGTCACCAC CATACTGACC
TATCTGATCA CCACCGTGGG GGCAGTGACC GCACTGGGAT CGCTGGGCGT ATCCTGGGAT
AAGCTGCAGT GGCTGGCGGC CGGTTTGACC GTCGGGCTGG GCTTCGGTTT ACAGGAGATT
TTCGCCAACT TTGTCTCCGG TCTGATTATC CTGTTTGAAC GGCCGATCCG TATCGGCGAT
ACCATTACTA TCGGCAGTTT CTCAGGCTCG GTCAGCAAAA TCCGCATTCG TGCCACTACC
ATCACCGACT TTGACCGCAA AGAAGTGATC ATCCCTAACA AGGCGTTTGT TACCGAGCGG
TTGATCAACT GGTCGCTGTC AGACACCATC ACCCGCGTAT TGATCAAGGT TGGCGTAGCC
TACGGATCTG ATCTGGACAA GGTGAAAGCG GTGCTGTTGC AGGCGGCGCG CGATAACCCG
CGGGTGATGA CCGATCCCGA GCCGCAGGTA TTCTTCCTGA ATTTCGGCGC CAGCACGCTG
GATCACGAAC TGCGCCTTTA CGTGCGTGAG TTGCGTGACC GTAGCTATAC CGTTGACGAA
CTGAACCGCT CGATCGAACG CCTGTGCCGC GAGAACGATA TCAATATTGC CTTCAACCAG
CTTGAGGTGT ATTTGCACAA TCAGCAGGGC AACGAGGTGC AGGAAGTGAA ACGGACATTA
TCGCCGGATG AAGGCGGTAC GTCGGCAGGA TGA
 
Protein sequence
MHRRLAKGSF LAFPSFLSVG LSRTLALFLL IAVCAVCQPA AYASLNGDLP SRSEIQSQIE 
ALNKQKTLTP VNKLTQQDLA RTLELLDAIE RTKQDGAQLK QQLQLAPGKL RQVTADLDAL
KTPVDGTAAR AELLQLSLRQ LETRLYQTLD DLQTAQENLS TYNSQLVSLQ TQPERVQSSM
YTASQRLQEI RNQINDQTPG QNSLRDSQLV MLATEQTLLN AQIDLQRKSL EANTTLQDLL
QKQRDYTTGH IDALDHNVQL LQEVVNSKRL TLSEKTAKEA QNPEDATDIQ HDQLVSKELD
VNRQLSQRLI AATEESNVLF QQNIRVKNWL DRGLQAERNL KEQIQVLKGS LVLSRILYQQ
QQSLPQGTLV ADMGTRIADL RLEQFDINQQ RDDLFKGDDY INKLVADSKE KASADVLDAL
NEIVDMRREL LDQLNKQLSN QLAQSINLQI NQQQLTSVNS SLRDTLTQQI FWVNSNKPVD
LAWLKALPGA VRDQLATLDF KLDLGKIVQG GLNSLVVLIP LLLLLGLLRW RYKLIDSHLQ
RLANDVGQLK RDGQLHTPKA ILLTLLKVVP GSALLLGAGF WGDRAEIGLS DFIWALSQQL
ALFWLIFGFT YRMLAVGGVC ERHFNFAPEL CAHYRRQTVR LGLALLPLIF WSVLGEKAPL
RLVEDVIGQV VVMLTLALLT VLVFPMCRDS WREKGSHAVR LVIVTAIAAT PLILLGLMFA
GYFYTTLRLA GRWIDSLYLF FLWNIVYLTA IRGLSVAARR LAYRRALARR QSLAKEKEGA
EGLEPVEEPP LALDQINQQS LRLTTMALFI IFASAFYAIW SDLVTVISYL DSITLWHYTS
TVAGSSVAQA VTLGNMMVAI AAVIVAYVMT RNLPGLLEVV VLSRLQLRQG TSYAVTTILT
YLITTVGAVT ALGSLGVSWD KLQWLAAGLT VGLGFGLQEI FANFVSGLII LFERPIRIGD
TITIGSFSGS VSKIRIRATT ITDFDRKEVI IPNKAFVTER LINWSLSDTI TRVLIKVGVA
YGSDLDKVKA VLLQAARDNP RVMTDPEPQV FFLNFGASTL DHELRLYVRE LRDRSYTVDE
LNRSIERLCR ENDINIAFNQ LEVYLHNQQG NEVQEVKRTL SPDEGGTSAG