| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1126 |
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| Symbol | |
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| ID | 5602471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 1237701 |
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| End bp | 1240847 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640936646 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001477358 |
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| Protein GI | 157369369 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000646715 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000481916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCTAAGT TCTTTATAGA TCGCCCTATT TTCGCCTGGG TAATCGCCAT CATCGTCATG
TTGGCGGGTG TGCTGTCAAT AATGAAACTG CCGATTGCGC AGTATCCAAC TATTGCACCA
CCGGCGGTCA GTATTTCCGC AAACTATCCG GGCGCAGATG CAAAAACGGT GCAGGATACC
GTGACTCAGA TTATCGAACA GAACATGAAC GGTATCGATA ATCTGATGTA CATGTCCTCC
ACCAGTGATT CCTCTGGTAG CGTTACCATT ACACTGACGT TTAACTCTGG AACAGACCCT
GACATCGCGC AGGTTCAGGT ACAGAACAAA CTGTCATTGG CTACGCCGTT ACTGCCGCAA
GAAGTACAGC AGCAGGGCCT GAAAGTTGAA AAGTCCAGCA GCAGCTTCCT GATGGTAGCC
GGCTTCATTT CCGACGATCC GAGCATGACT CAGGACGACA TCGCGGACTA TGTGGCCTCT
AACATCAAGG ACCCGATCAG CCGTTCATCC GGCGTGGGTG AAGTGCAGCT GTTTGGTGCC
CAGTACGCGA TGCGTGTCTG GTTGGATCCA AATAAGCTCA ATAACTTCCA GCTGACCACT
ACTGATGTGA CGTCCGCCAT TACCGAGCAG AACAACCAAA TCGCCGCAGG GCAATTGGGT
GGGATGCCAC CGGTGCCGGG TCAACAGCTT AACGCCTCGA TCATCGCGCA GACCCGTCTG
ACCTCTCCAG AAGAGTTCGG CAAAATTCTG CTGAAGGTGA ATGCCGACGG TTCTCAGGTT
CGCCTGAGCG ACGTGGCACA CATTGAGCGC GGAGCTGAAA GCTATGCGGT GACCGCACGT
TATAACGGCA AACCGGCGGC AGGCCTGGGT ATCAAACTGG CTACCGGTGC CAACGCCCTG
AACACCGCTC AAGGTGTGAA AGACGCGCTG ACCAAAATGC AGCCTTTCTT CCCGCAAGGG
ATGAAAGTGG TTTATCCGTA CGACACCACG CCGTTCGTTA AAATCTCGAT TAACGAAGTG
GTGAAAACGC TGATCGAAGC CATCATCCTG GTATTCCTGG TGATGTATTT GTTCCTGCAA
AACTTCCGCG CAACCCTGAT CCCGACCATT GCGGTACCGG TGGTGTTGCT GGGGACCTTT
GCCATTTTGG CGGCCTTCGG CTTCTCGATA AACACCCTGA CGATGTTCGG CATGGTGCTG
GCGATAGGCT TGTTGGTGGA TGATGCCATC GTGGTGGTAG AAAACGTCGA GCGTGTGATG
TCCGAAGAGG GACTGCCGCC GAAGGAAGCC ACCAAGAAAT CGATGGAGCA GATCCAGGGC
GCGTTGGTCG GTATTGCCAT GGTGCTGTCG GCGGTATTCG TCCCTATGGC GTTCTTCGGC
GGCTCGACCG GTGCTATCTA CCGTCAGTTC TCCATCACCA TCGTTTCTGC GATGGCGCTG
TCAGTACTGG TAGCGTTGAT TCTGACGCCT GCACTGTGCG CCACCTTGTT GAAACCCGTA
GCGAAAGGCG ACCACGGGGT TAAAACCGGC TTCTTCGGTT GGTTTAACCG CATGTTCGAA
AAGAGCACCC ATCACTACAC CGACAGCGTA GCCAACATTC TGCGCAGCAC CGGTCGTTAT
CTGGTGATCT ACCTGCTGAT CGTTGTCGGC ATGGCGCTGC TGTTCCTGCG CTTGCCTTCC
TCGTTCCTGC CGGACGAAGA CCAGGGTATT TTGCTGACCA TGGTGCAGTT GCCTGCAGGT
GCTACCGAAG CGCGTACCTC TAAGGTTCTG GAAGAAGTCA CCGACTACTT CATGACCAAA
GAAAAAGACA ACGTGGTTTC GGTGTTTACC GTTGCGGGCT TCGGCTTTAA CGGTAACGGT
CAGAACAACG GTCTGTCATT CGTCAGCCTG AAAGATTGGT CTGAACGTAA AGGTGAAGAG
AATAAGGTAC CGGCGATTGC AGGCCGCGCA ATGGGCGCGT TCTCGCAAAT CAAAGATGGC
CTGGTATTCC CGTTCAACCT GCCGGCGATT ATCGAACTGG GTACAGCGAC CGGTTTTGAC
TTCCAGCTGA TTGACCAGGG TGGCCTGGGG CATGAAAAAC TGACCGAAGC ACGTAACCAG
TTGCTGGGCA TGGCTGCCAA GCATCCGGAC ATGCTGGTGG GCATGCGCCC TAACGGTCTG
GAAGATACGC CGCAGTTCAA ACTGATTATC GACCAGGAAA AAGCCAAGGC ACTGGGCGTT
AGCATCACCA CCATTAACAG CACGCTGAGC ACCGCGTTGG GTGGCTCTTA CGTTAACGAC
TTCATCGACC GTGGTCGTGT GAAGAAAGTA TACGTACAGG CTGATGCGCC GTTCCGTATG
TTGCCGGAAG ATATCAATAA ATGGTTTGTC CGCGGCACCA GCGGCCAGAT GGTTCCGTTC
TCCGCCTTCT CCTCGGCGAA ATGGGAATAC GGTTCACCGC GTCTGGAACG TTATAACGGT
CTGCCTTCCA TGGAAATTTT GGGTCAGGCA ACGCCAGGCA AGAGTACCGG TGAAGCCATG
AACCTGATGG AAGAACTGGC CTCCAAGCTG CCGAGCGGCA TTGGTTACGA CTGGACCGGT
ATGTCCTATC AGGAACGTCT GTCCGGTAAC CAGGCTCCAG CACTGTATGC CATCTCGATT
CTGGTGGTGT TCCTGTGTCT GGCAGCATTG TACGAGAGCT GGTCAATTCC GTTCTCGGTC
ATGCTGGTTC TGCCACTGGG GGTTATCGGT GCGTTGCTGG CGGCCACCAT GCGCGGCCTT
AACAACGACG TTTACTTCCA GGTGGGGCTG TTGACCACCA TAGGTCTGTC GGCGAAGAAC
GCCATATTGA TTGTGGAATT CGCCAAGGAC CTGATGGATA AAGAAGGCAA GGGTCTGATA
GAAGCCACGT TGGAAGCGGT GCGTATGCGT CTGCGTCCAA TTCTGATGAC TTCTCTGGCA
TTCATCCTCG GGGTTCTGCC GCTGGTTATC AGCAGCGGTG CAGGCTCCGG TGCACAGAAC
GCGGTAGGTA CCGGCGTTAT GGGCGGGATG ATTACCGCGA CCGTGCTGGC CATCTTCTTC
GTTCCGGTCT TCTTCGTGGT GGTTCGCCGC CGCTTCAGCA AGAAGTCCGA AGATGTGGAA
CACAGCCACC CGGTTGATCA TCACTGA
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| Protein sequence | MAKFFIDRPI FAWVIAIIVM LAGVLSIMKL PIAQYPTIAP PAVSISANYP GADAKTVQDT
VTQIIEQNMN GIDNLMYMSS TSDSSGSVTI TLTFNSGTDP DIAQVQVQNK LSLATPLLPQ
EVQQQGLKVE KSSSSFLMVA GFISDDPSMT QDDIADYVAS NIKDPISRSS GVGEVQLFGA
QYAMRVWLDP NKLNNFQLTT TDVTSAITEQ NNQIAAGQLG GMPPVPGQQL NASIIAQTRL
TSPEEFGKIL LKVNADGSQV RLSDVAHIER GAESYAVTAR YNGKPAAGLG IKLATGANAL
NTAQGVKDAL TKMQPFFPQG MKVVYPYDTT PFVKISINEV VKTLIEAIIL VFLVMYLFLQ
NFRATLIPTI AVPVVLLGTF AILAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
SEEGLPPKEA TKKSMEQIQG ALVGIAMVLS AVFVPMAFFG GSTGAIYRQF SITIVSAMAL
SVLVALILTP ALCATLLKPV AKGDHGVKTG FFGWFNRMFE KSTHHYTDSV ANILRSTGRY
LVIYLLIVVG MALLFLRLPS SFLPDEDQGI LLTMVQLPAG ATEARTSKVL EEVTDYFMTK
EKDNVVSVFT VAGFGFNGNG QNNGLSFVSL KDWSERKGEE NKVPAIAGRA MGAFSQIKDG
LVFPFNLPAI IELGTATGFD FQLIDQGGLG HEKLTEARNQ LLGMAAKHPD MLVGMRPNGL
EDTPQFKLII DQEKAKALGV SITTINSTLS TALGGSYVND FIDRGRVKKV YVQADAPFRM
LPEDINKWFV RGTSGQMVPF SAFSSAKWEY GSPRLERYNG LPSMEILGQA TPGKSTGEAM
NLMEELASKL PSGIGYDWTG MSYQERLSGN QAPALYAISI LVVFLCLAAL YESWSIPFSV
MLVLPLGVIG ALLAATMRGL NNDVYFQVGL LTTIGLSAKN AILIVEFAKD LMDKEGKGLI
EATLEAVRMR LRPILMTSLA FILGVLPLVI SSGAGSGAQN AVGTGVMGGM ITATVLAIFF
VPVFFVVVRR RFSKKSEDVE HSHPVDHH
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