| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1064 |
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| Symbol | secF |
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| ID | 5606771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1171290 |
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| End bp | 1172258 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640936583 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001477296 |
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| Protein GI | 157369307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00204402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCACAGG ATTATACTGT TGAACAACTC AACTACGGCC GTAAAGTCTA TGACTTTATG
CGCTGGGATT ACGTGGCCTT CGGCATCTCG CTGTTGCTGC TGATCGCGTC AATCGCCATT
ATGTCGGTGC GTGGTTTTAA CTGGGGTCTG GACTTCACTG GCGGTACCGT CATTGAAATC
AGCCTGGAAC AACCGGCCAA CCTCGATCTG ATGCGCGATA CGCTGGAAAA AGCCGGGTTC
CAGGACCCGA TTATTCAGAA CTTTGGCAGC AGCCGTGACG TGATGGTGCG TATGCCACCG
GCGATCGGCA CCGCAGGCCA GGAACTGGGT AACAAAGTCA TCAGCGTGAT TAACGACTCG
GTCGATAAAA ACGCCACGGT GAAGAGGATT GAGTTCGTCG GCCCGAGTGT GGGCACCGAA
CTGGCGCAAA ACGGCGGCAT GGCGCTGCTG GTAGCGCTGA TCTGTATTCT GATTTACGTC
GGTTTCCGCT TCGAATGGCG CCTGGCGCTG GGGGCGGTTA TCGCGTTGGC GCACGACGTG
GTCATCACTC TGGGCGTGCT GTCGTTGTTC CATATCGAGA TTGACCTGAC CATCGTCGCA
TCATTGATGT CGGTTATCGG TTACTCGTTG AACGACAGCA TCGTGGTTTC CGACCGTATT
CGTGAGAACT TCCGCAAGAT CCGTCGCGGC ACGCCTTACG AAATCATGAA CGTGTCGTTG
ACCCAGACGC TGAGCCGTAC CTTGATGACC TCCGGTACCA CCCTGATGGT GGTTCTGATG
CTGTACATCT TCGGCGGCGC GATGCTGCAC GGCTTCTCTC TGGCTATGCT GATTGGTGTG
TCTATCGGTA CCATATCCTC TATCTACGTG GCGTCCGCGC TGGCGTTGAA ACTGGGTATG
AAACGCGAAC ACATGCTGCA GCAGAAAGTG GAAAAAGAGG GCGCAGATCA GCCTTCGATT
ATGCCGTGA
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| Protein sequence | MAQDYTVEQL NYGRKVYDFM RWDYVAFGIS LLLLIASIAI MSVRGFNWGL DFTGGTVIEI
SLEQPANLDL MRDTLEKAGF QDPIIQNFGS SRDVMVRMPP AIGTAGQELG NKVISVINDS
VDKNATVKRI EFVGPSVGTE LAQNGGMALL VALICILIYV GFRFEWRLAL GAVIALAHDV
VITLGVLSLF HIEIDLTIVA SLMSVIGYSL NDSIVVSDRI RENFRKIRRG TPYEIMNVSL
TQTLSRTLMT SGTTLMVVLM LYIFGGAMLH GFSLAMLIGV SIGTISSIYV ASALALKLGM
KREHMLQQKV EKEGADQPSI MP
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