Gene Spro_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1062 
SymbolyajC 
ID5606760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1169074 
End bp1169406 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content53% 
IMG OID640936581 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001477294 
Protein GI157369305 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.9983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00140347 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTTTT TCATTTCTGA CGCCGTCGCA TCCGCAGGAG CTCCGTCTCA GGGAAGCCCG 
TACTCTCTGA TCATTATGCT GGTGGTTTTT GGCCTGATTT TCTATTTCAT GATCCTGCGT
CCACAGCAGA AACGCGCTAA AGAGCACAAG AAACTGATGG ACTCGATCGG CAAGGGTGAT
GAAGTGCTGA CCACCGGTGG CCTGATTGGT CGCGTGACCA AAGTGGCTGA CACCGGCATC
ATCGCTATTG CGCTGAACGA CACCACGGAA GTGATGATCA AGCGTGACTT CGTGGCGGCC
GTTCTGCCGA AAGGTACCAT GAAGGCCCTG TAA
 
Protein sequence
MSFFISDAVA SAGAPSQGSP YSLIIMLVVF GLIFYFMILR PQQKRAKEHK KLMDSIGKGD 
EVLTTGGLIG RVTKVADTGI IAIALNDTTE VMIKRDFVAA VLPKGTMKAL