| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0959 |
|---|
| Symbol | |
|---|
| ID | 5605183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1057070 |
|---|
| End bp | 1058101 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640936480 |
|---|
| Product | ApbE family lipoprotein |
|---|
| Protein accession | YP_001477193 |
|---|
| Protein GI | 157369204 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAT GGGCAATGAA GGGGTTGATG ACGACGGTGG CGCTCAGCGC CACCCTGTTA
TTGACCGGCT GCGGACCGGA GCAGGTCAAT CTCGATGGCA AAACCATGGG GACATCGTAT
TCAGTTCGCT ACGTCACCGG GGACGACACG CCGTCTGCCG CCAAAATGCA GGCGGAGATC
GACAAGCGTC TGGAGTTGGT GAACGACCAA ATGTCCACCT ACCGGCCAGG CTCTGAACTG
AGCCGCTTCA ACGCCAGTCG CGCTGTTGAT AAACCCTTCC CGGTATCGGC GGCAACCACC
GAGGTGGTGC TGGAAGCGCT GCGCATTAAC CGCGTCACCG ACGGTGCGCT GGACGTGACC
GTCGGGCCGC TGGTTAATCT GTGGGGCTTT GGCCCGGAAG GGCGGCCGGA CAAGGTGCCG
AGCGCTGCCG AACTGGAGCG CCGCCGAGCC TGGACCGGTA TCGACAAACT GTCGGTGCAG
GGCAATGCAT TGGTAAAGAG CATTCCTGAG CTGTATGTCG ATCTCTCCTC GATCGCCAAG
GGCTACGGGG TGGATGTAAT TGCCCAGTAT CTGCAGTCGC AGCAGGTCAA GAACTACATG
GTGGATATTG GCGGTGAGGT ACGTACTCGT GGCCATAACG GTGAGAAAAA ACCGTGGCGT
ATCGCCATTG AACGGCCGAC GGCCGGCATG GAGCAGAAGG CACAACTGGT GATCCAGCCG
GGCGAGATGT CGATCGCCAC CTCGGGGGAT TATCGCAACT ACTTCGAACA GGGCGGCGTG
CGTTATTCTC ACACCATAGA TCCGGTTACC GGCAAGCCTA TCCATCATCA TCTGGTGTCG
GTTACGGTGC TGAGCCCGAC CTGTATGGCC GCCGATGGTT TGTCGACCGG GTTGAACGTA
TTGGGGCCGG AGCGCGGCAT GGCGTTGGCG AACCTGATGG GGATCCCGGT GTTCATGATT
GTGAAAACCA CCAAAGGTTT TGAAGAGCGC TACTCCGAAG CGTTCAAACC CTATTTGAAC
AAGAGCTTGT GA
|
|---|
| Protein sequence | MRAWAMKGLM TTVALSATLL LTGCGPEQVN LDGKTMGTSY SVRYVTGDDT PSAAKMQAEI
DKRLELVNDQ MSTYRPGSEL SRFNASRAVD KPFPVSAATT EVVLEALRIN RVTDGALDVT
VGPLVNLWGF GPEGRPDKVP SAAELERRRA WTGIDKLSVQ GNALVKSIPE LYVDLSSIAK
GYGVDVIAQY LQSQQVKNYM VDIGGEVRTR GHNGEKKPWR IAIERPTAGM EQKAQLVIQP
GEMSIATSGD YRNYFEQGGV RYSHTIDPVT GKPIHHHLVS VTVLSPTCMA ADGLSTGLNV
LGPERGMALA NLMGIPVFMI VKTTKGFEER YSEAFKPYLN KSL
|
|---|
| |