Gene Spro_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0918 
Symbol 
ID5604391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1016515 
End bp1018755 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content56% 
IMG OID640936439 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001477152 
Protein GI157369163 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC GCAAACACCT CTGGGTATTA AATCCTTGTC TGCTGGCGAT GATCGCACCA 
GCAGCAGCCT GGGCAGAAGA ACAAAAAAGC GAAGAGCAAA TGGTGGTTTC CGCCAGCCGT
GCGCACCGTA CCGTAGCAGA GATGGCGCAG ACCACCTGGG TGATTGAGAG CCAGGAAATT
GAGCAACAGG TACAGGGCGG CAAAGAGATC AAGGACATGC TGGCGCAGTT GATCCCGGGG
ATGGACGTCA GCGGTCAGGG CCGAACCAAC TACGGCATGA ACCTGCGTGG CCGTTCAATG
ATGGTGATGA TCGACGGCGT GCGTTTGAAC TCTTCGCGCA GCGACAGCCG CCAGTTGGAT
TCGATCGACC CGTTTAATAT CGACCACATT GAAGTGATCT CCGGTGCCAC CTCGCTGTAC
GGCGGCGGCA GCACCGGCGG TTTGATCAAC ATCGTCACCA AAAAAGGCCA GAAAGAGCAG
CAGGTTGAGC TGCAGATCGG CGGCAAAACC GGCTTTGGCG GCCATAACGA CCACGACGAA
AACGTGGCGG CGGCGGTCAG CGGCGGCAAC GATAATGCCT CGGGCCGCCT GTCGGTCTCT
TACCAGCGCT ACGGCGGCTG GTACGACGGC AAGGGCAATG AAGTCCTGAT CGACAATACC
CAGACTGGCC TGCAGTATTC CGATCGCCTC GACGTGATGG GTACCGGCAC CATTAATATC
GACGATCACC AGCAGCTGCA ACTGACCACC CAGTATTACA AAAGCCAGTC CGACGGCGAC
CACGGCCTGT TCCTGGGGGA GAATTTCTCC GCGGTGACCG GCAGCGCCAA AGCTTATAAC
AGCGGCAACC TGAATTCGGA TCGTATTCCT GGCACTGAAC GTCACCTGAT CAACCTGCAG
TACTCCAATA CCGATTTCCT CGGGCAGGAT CTGGTGGCGC AGGTTTATTA TCGCGATGAG
TCGCTGACCT TCTACCCGTT CCCGACGCTG GCGGGCAAAG CGCCGGACTA CTACGTCAGC
AGCATCGGTG CCTCGCAGCA GAAAACCGAT TTTTACGGCG GCAAGCTGAC GCTGAACAGC
AAACCGATCG ACGCCCTGAC GCTGACCTAC GGCATCGACG CCGAGCATGA AAGCTTCAAC
TCCAACCAGC AGTTCTTCGA TCTGGCCAAG GCGCAACAGT CCGGCGGCAT GGACTTGCAA
AACGCCTATA ACACCGGGCG TTACCCAGGC TACACCACCA GCAATCTGGC CACCTTTATG
CAGGCCAGTT ACGATATCAA CCCTATCTTT ACCCTTAGCG GCGGTGTGCG TTATCAGTAC
ACTGAAAACA AGATTGATGA CTTTGTTGGC TATAACCAAC AGCAGGCCAT CGCCACCGGC
GGCGCGACCT CAGCGGACGC GATCCCAGGT GGGAAAACCG ACTATAACAA CGCCCTGTTC
AACGCCGGCC TGCTGGCACA CCTGACCGAA CGTCAACAGA CCTGGGTCAA CTTCTCGCAG
GGCTACGAGA TCCCGGATCC GGGCAAATAT TACGGCAACG GCACTTATTC GCTGAACAAC
GGCCACTATC AGTTGAACAA AAGCGTCAAC GTCGGCGATT CCAAGCTGGA AGGCATTAAG
GTTAACTCTT ATGAGCTCGG CTGGCGCTAT ACCGGTGACA ACCTGCGTAC GCAGATCGCC
GGCTACTACT CACTGTCTGA TAAGAGCATT TCGATCAACA AAACCGATAT GACCATCAAC
GTCAATTCGG ATAAGCGTCG TATCTACGGG GTGGAAGGCG CGGTCGATTA CTTCTTCGAA
GACAGTGACT GGAGCGCGGG CACCAACTTC AACTTCATTC GCTCCGAGAC CAAGGTCAAC
GGCGAGTGGA AAAAACTGTT GGTTGACACG GCCAGCCCAT CGAAAGTCAC CGCCTATGTC
GGCTGGGCAC CGGGCGACTG GAACCTGCGC CTGCAGTCGC AGCAGAGCTT CGACGTCTCG
GATGACGGTG ATTACACCAA GGTCGGCTCC ACTCAGGGCC GCAAAATTGA TGGCTACAAC
ACCATCGATT TCCTCGGCAG CTACGCCCTG CCGGTGGGTA AACTCAGCTT TAGCGTAGAG
AACCTGCTGG ACAAGGAATA CACCACCGTC TGGGGCCAGC GCGCACCGAT CCTTTATAGC
CCAACCTACG GCTCACCAGA GCTTTACAGC TATAAAGGCC GTGGCCGCAC CTTTGGCCTG
AACTACTCCG TACTGTTCTG A
 
Protein sequence
MMKRKHLWVL NPCLLAMIAP AAAWAEEQKS EEQMVVSASR AHRTVAEMAQ TTWVIESQEI 
EQQVQGGKEI KDMLAQLIPG MDVSGQGRTN YGMNLRGRSM MVMIDGVRLN SSRSDSRQLD
SIDPFNIDHI EVISGATSLY GGGSTGGLIN IVTKKGQKEQ QVELQIGGKT GFGGHNDHDE
NVAAAVSGGN DNASGRLSVS YQRYGGWYDG KGNEVLIDNT QTGLQYSDRL DVMGTGTINI
DDHQQLQLTT QYYKSQSDGD HGLFLGENFS AVTGSAKAYN SGNLNSDRIP GTERHLINLQ
YSNTDFLGQD LVAQVYYRDE SLTFYPFPTL AGKAPDYYVS SIGASQQKTD FYGGKLTLNS
KPIDALTLTY GIDAEHESFN SNQQFFDLAK AQQSGGMDLQ NAYNTGRYPG YTTSNLATFM
QASYDINPIF TLSGGVRYQY TENKIDDFVG YNQQQAIATG GATSADAIPG GKTDYNNALF
NAGLLAHLTE RQQTWVNFSQ GYEIPDPGKY YGNGTYSLNN GHYQLNKSVN VGDSKLEGIK
VNSYELGWRY TGDNLRTQIA GYYSLSDKSI SINKTDMTIN VNSDKRRIYG VEGAVDYFFE
DSDWSAGTNF NFIRSETKVN GEWKKLLVDT ASPSKVTAYV GWAPGDWNLR LQSQQSFDVS
DDGDYTKVGS TQGRKIDGYN TIDFLGSYAL PVGKLSFSVE NLLDKEYTTV WGQRAPILYS
PTYGSPELYS YKGRGRTFGL NYSVLF