Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0827 |
Symbol | ispF |
ID | 5603032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 920899 |
End bp | 921372 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640936338 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001477061 |
Protein GI | 157369072 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.317282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTATCG GTCACGGTTT TGACGTACAT AAATTTGGTG GCGAAGGGCC GCTGGTGATC GGTGGTGTTC GTATCCCTTA TGAAAAAGGT TTGCTGGCTC ACTCCGACGG TGACGTGGCG CTGCATGCGG CGACCGATGC TCTGTTGGGG GCGGCGGCGT TAGGGGATAT CGGCAAGCTG TTCCCGGATA CCGACCCGGC ATTCAAAGGG GCCGACAGCC GCGTTCTGCT GCGTGAGGCC TGGAAACGCA TCCGCGCCAA AGGCTATCGT CTGGGGAATC TGGATATCAC CATTATTGCC CAGGCCCCTA AAATGGCGCC GCATATCCCG CAAATGCGCG TATTCCTGGC GGAAGATCTG CAGTGCCATA TGGACGACGT CAACGTTAAG GCCACCACCA CCGAACAGCT CGGTTTCACC GGGCGCGGCG AGGGCATTGC CTGTGAAGCG GTTGCCTTGT TGATCAAGGA ATAA
|
Protein sequence | MRIGHGFDVH KFGGEGPLVI GGVRIPYEKG LLAHSDGDVA LHAATDALLG AAALGDIGKL FPDTDPAFKG ADSRVLLREA WKRIRAKGYR LGNLDITIIA QAPKMAPHIP QMRVFLAEDL QCHMDDVNVK ATTTEQLGFT GRGEGIACEA VALLIKE
|
| |