Gene Spro_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0822 
Symbol 
ID5603086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp917138 
End bp917860 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID640936333 
ProductABC transporter-related protein 
Protein accessionYP_001477056 
Protein GI157369067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.483351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGCG TACATAACCT GCAAAAACAA TTCGGCGAAA GCCACGTACT GCGTGGTATC 
TCCTGCGAGA TCGCGGCCAA CGAAGTGGTC TGCGTCATTG GCCCGTCCGG TTCCGGTAAA
AGTACCTTTC TGCGCTGTAT CAACGCGCTG GAGACGCTCT CCGGCGGCGA AGTCCTGGTC
AACGGTTTCG CCATTCACAG CCAGAAAACC GATCTCAATA AAATGCGTGA AAGCGTGGGG
ATGGTGTTTC AGCGCTTTAA CCTGTTCCCG CATATGACAG TGCTGGAGAA TATTATTATG
GCGCCGATGG GGGTGAAAAA ACTGTCGCGT GCCGACGCCA ACCTGCGTGC AGAAGCGCTG
TTACGCAAGG TGGGTCTGTT GGACAAGATA GACGCCTATC CCAGCAGCCT GTCCGGCGGC
CAGCAACAGC GGGTGGCCAT TGCCCGGGCG CTGGCGATGG AGCCAAAAAT CATGTTGTTC
GACGAACCCA CCTCAGCACT TGATCCCGAG TTGGTCGGCG AAGTGCTGGC GGTGATGAAG
TCATTGGCAC ACGAAGGTAT GACCATGGTG GTGGTAACCC ACGAGATGGG CTTTGCCCGT
GAAGTAGCCG ATCGGGTGTT GTTTATCGAT CAGGGGATCA TTCAGGAAGA AGGCACACCG
CAGCAGATTT TCAGCAATCC GACCAACCCG CGCACTCAGG CTTTTCTAAG CAAAGTTTTG
TAA
 
Protein sequence
MIRVHNLQKQ FGESHVLRGI SCEIAANEVV CVIGPSGSGK STFLRCINAL ETLSGGEVLV 
NGFAIHSQKT DLNKMRESVG MVFQRFNLFP HMTVLENIIM APMGVKKLSR ADANLRAEAL
LRKVGLLDKI DAYPSSLSGG QQQRVAIARA LAMEPKIMLF DEPTSALDPE LVGEVLAVMK
SLAHEGMTMV VVTHEMGFAR EVADRVLFID QGIIQEEGTP QQIFSNPTNP RTQAFLSKVL