| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0745 |
|---|
| Symbol | |
|---|
| ID | 5604888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 828859 |
|---|
| End bp | 830433 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640936256 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_001476979 |
|---|
| Protein GI | 157368990 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC AAGTCATTAT TTTCGATACA ACGCTGCGTG ATGGTGAACA AGCGCTGCAA
GCCAGCCTGA GCGTGAAAGA GAAGATTCAG ATCGCGATGG CGCTGGAAAG AATGGGTGTC
GACGTCATGG AAGTCGGCTT CCCGGTCTCC TCGCCGGGCG ATTTTGAATC TGTGCAAACC
ATCGCGCGCC AGATTAAAAA CAGCCGCGTA TGTGGCCTGG CCCGTTGCGT GGATAAAGAT
ATCGACGTCG CAGCCGAAGC GTTGCGCGTA GCCGAAGCCT TCCGTATTCA CGTGTTCCTG
GCCACCTCAA CCCTGCATAT TGAATCAAAA CTGAAGCGCT CGTTCGACGA AGTGCTGGAG
ATGGCGATCC GCTCGGTGAA ACGCGCCCGT AATTACACCG ACGACGTAGA ATTCTCCTGT
GAAGACGCAG GCCGTACGCC AATCGATAAC CTGTGTCGCG TGGTAGAAGC CGCGATCAAC
GCCGGTGCCA CCACCATTAA CATTCCGGAT ACCGTGGGCT ACACCACGCC GAACCAGTTT
GGTGGCATTA TCACTACCCT GTATGACCGC GTACCGAATA TCGATAAGGC CATTATCTCC
GTCCACTGCC ACGACGACCT GGGTATGGCG GTCGGCAACT CCATCGCCGC GGTGCAGGCG
GGTGCTCGCC AGGTCGAAGG CACCTTGAAC GGCATTGGTG AACGCGCAGG CAATACCTCG
CTGGAAGAAG TGATCATGGC GATCAAAGTG CGCCAGGACA TCATGAACGT GCACACCAAT
ATCAATCATC AGGAAATTTT CCGCACCAGC CAAATCGTCA GCCAGCTGTG CAACATGCCG
ATCCCGGCCA ACAAGGCTAT CGTCGGTTCC AATGCCTTCG CCCACTCTTC TGGCATTCAT
CAGGACGGCG TGCTGAAAAA TCGTGAAAAC TACGAAATCA TGTCACCGCA GACCATAGGT
CTGAAAGATG TGCAGTTGAA CCTGACCTCT CGTTCCGGCC GCGCCGCAGT GAAACACCGT
ATGGAAGGGA TGGGCTACAA AGAACAGGAC TACAACCTGG ACAACCTGTA CGCCGCCTTC
CTGAAGCTGG CCGATAAGAA AGGTCAGGTG TTCGATTACG ATCTGGAAGC TCTGGCCTTC
ATTAATAAGC AGCAGGAAGA ACCCGAGCAT TTCAGCCTGG ACTACTTCAG CGTGCAGTCA
GGCAGCAGCA TCATGGCCAC CGCATCGGTG AAATTGATCT GCGGTGAAGA AGAAAAAGCC
GAAGCGGCCA CCGGCAACGG GCCGGTTGAC GCGGTCTATC AGGCCATCAA CCGCATTACC
GGATACCCGA TCGAACTGGT GAAATACCAG TTAACCGCCA AAGGCCAGGG CCGTGACGCA
CTGGGCCAGG TGGATATCGT GGTGTCCTAC AACGGCCGCC GCTTCCACGG CGTGGGTCTG
GCGACCGACA TTGTGGAATC CTCTGCCAAG GCGATGGTTC ACGTATTAAA TAATATTTGG
CGCTCCCAGC AGGTAGAAAA AGAAAAACAG CGTCTGCAGC AAAGCAAACA TCAAAATAAT
CAGGAAACGG TGTGA
|
|---|
| Protein sequence | MSQQVIIFDT TLRDGEQALQ ASLSVKEKIQ IAMALERMGV DVMEVGFPVS SPGDFESVQT
IARQIKNSRV CGLARCVDKD IDVAAEALRV AEAFRIHVFL ATSTLHIESK LKRSFDEVLE
MAIRSVKRAR NYTDDVEFSC EDAGRTPIDN LCRVVEAAIN AGATTINIPD TVGYTTPNQF
GGIITTLYDR VPNIDKAIIS VHCHDDLGMA VGNSIAAVQA GARQVEGTLN GIGERAGNTS
LEEVIMAIKV RQDIMNVHTN INHQEIFRTS QIVSQLCNMP IPANKAIVGS NAFAHSSGIH
QDGVLKNREN YEIMSPQTIG LKDVQLNLTS RSGRAAVKHR MEGMGYKEQD YNLDNLYAAF
LKLADKKGQV FDYDLEALAF INKQQEEPEH FSLDYFSVQS GSSIMATASV KLICGEEEKA
EAATGNGPVD AVYQAINRIT GYPIELVKYQ LTAKGQGRDA LGQVDIVVSY NGRRFHGVGL
ATDIVESSAK AMVHVLNNIW RSQQVEKEKQ RLQQSKHQNN QETV
|
|---|
| |