| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0701 |
|---|
| Symbol | ispH |
|---|
| ID | 5605464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 773614 |
|---|
| End bp | 774567 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640936212 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_001476935 |
|---|
| Protein GI | 157368946 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.944772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0742158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAT TGCTGGCTAA CCCACGCGGC TTTTGCGCCG GGGTTGATCG TGCGATCAGT
ATCGTTGAAC GCGCGCTGGA AATTTACGGT GCGCCTATCT ACGTGCGTCA CGAAGTGGTG
CATAACCGCT ACGTGGTCGA TAGCCTGCGT GAGCGTGGGG CGGTGTTTAT TGAGGAAATC
ACCGAAGTGC CGGACGGGTC GATTCTGATC TTCTCGGCGC ACGGGGTTTC CCAGGCGGTA
AGAGCAGAGG CCAAGGCGCG TGATTTAACC ATGCTGTTTG ACGCCACCTG CCCGTTGGTG
ACCAAGGTGC ATATGGAGGT GGCGCGAGCC AGCCGCCGTG GCACCGAGGC GATCCTGATC
GGCCACGCCG GTCACCCGGA AGTGGAAGGT ACCATGGGCC AGTACAGCAA CCCGAAGGGC
GGCATGTACC TGGTGGAGTC ACCGGACGAC GTCTGGAAGC TGCAGGTGAA GGATGAAAGC
AACCTGTGTT TTATGACGCA AACCACGCTG TCGGTGGACG ACACTTCTGA CGTGATTGAT
GCCTTGCGCA AGCGTTTCCC GAGCATTATC GGGCCGCGTA AGGACGACAT CTGCTACGCA
ACCACCAACC GTCAGGAAGC GGTACGCAAC CTGGCCGGGG ATGCGGACGT GGTGCTGGTG
GTGGGGTCGA AAAACTCGTC CAACTCCAAC CGTTTGGCCG AATTGGCGCA GCGTGTTGGC
AAACCGGCAT ACCTGATCGA TTCCGCCGCT GACATTCAGG AAGCCTGGCT GAAGGACGCT
CATAATATCG GCGTTACCGC TGGGGCTTCG GCACCTGATG TGTTGGTACA GGATGTTATC
AGCCGCCTGA AAGCGCTGGG CGGTGTCAAC GTGCAGGAAG TCAGCGGCCG TGAAGAGAAC
ATCGTGTTCG AAGTACCGAA AGAGCTGCGG GTTGATATCA AACAGGTCGA TTAA
|
|---|
| Protein sequence | MQILLANPRG FCAGVDRAIS IVERALEIYG APIYVRHEVV HNRYVVDSLR ERGAVFIEEI
TEVPDGSILI FSAHGVSQAV RAEAKARDLT MLFDATCPLV TKVHMEVARA SRRGTEAILI
GHAGHPEVEG TMGQYSNPKG GMYLVESPDD VWKLQVKDES NLCFMTQTTL SVDDTSDVID
ALRKRFPSII GPRKDDICYA TTNRQEAVRN LAGDADVVLV VGSKNSSNSN RLAELAQRVG
KPAYLIDSAA DIQEAWLKDA HNIGVTAGAS APDVLVQDVI SRLKALGGVN VQEVSGREEN
IVFEVPKELR VDIKQVD
|
|---|
| |