| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0589 |
|---|
| Symbol | |
|---|
| ID | 5606464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 653756 |
|---|
| End bp | 654649 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640936097 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001476823 |
|---|
| Protein GI | 157368834 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA AACAGTTACG CGCGTTTTTA GCGGTAGCTC ACACTCTTAA CTTCGCCCAG
GCGAGCGAAC GGCTGAATAT TTCGCAGCCG GCGCTGAGTC TCGCCATTCG CGGACTGGAA
GAGGTGTTGG GGGGACAGTT GCTGCTGCGT ACCACCCGAC GTGTGGCGCT GACGCCGGAA
GGGGAAAGCT TCTTCCCGAT GGCGCGCCAA CTGTTGGCGG ACTGGGACAA TGCGGAAGAG
GCGATGCGTC AGCGTTTTAC CCTGCAACTG GGCAAAGTGG CGATCGCTGC CATGCCTTCG
TTCGCTGCCA ACCCGCTGCC GCCGATCCTG AAAGTGTTTC GCGATCACTA CGCCGGGATC
AACGTGGCGG TGCACGACGT GATTAACGAG CAGGTGTTCG AGATGATCCG CGAAGGCCGG
GTGGAAATGG GCATTGCCTT CGAGCCGGAG CCCAGCGATA CCCTGCACTT CACCCCGTTG
TGCAACGATC GCTTTGTGGC GGTGGTGCCA AAGCATTCAC CGCTGGCGAG CCGGGCGCAG
GTGAGCTGGA AAGAGTTGTT GACGCTGGAC TTTATTACCC TGCAGCGCCC TTCTGCGGTG
CGTCTGTTGC TGGAACAAAC GCTGGCCAAA AGCGGCAGAA CGCTGGAGGT GGCGTTTGAA
AGCCACCAGT TGGTGACGGT CGGCCGCATG GTGGCTAACG GACTGGGCGC CAGCGCGGTA
CCGGCGCTGT GTGAACAACA GATGGGCGAG TTAGGTGCAA CCTGCGTGCC GTTATTCGGC
CCGGTGATTG AACGCCGGGT CGGACTGATC CGCCTCGCCC AGCACCGTCT GTCTTCGGCG
GCTCAGGCGC TGGCCGGGGT GATTGAACGG GAAATGGCGA TGAGTGGAGT TTAA
|
|---|
| Protein sequence | MSIKQLRAFL AVAHTLNFAQ ASERLNISQP ALSLAIRGLE EVLGGQLLLR TTRRVALTPE
GESFFPMARQ LLADWDNAEE AMRQRFTLQL GKVAIAAMPS FAANPLPPIL KVFRDHYAGI
NVAVHDVINE QVFEMIREGR VEMGIAFEPE PSDTLHFTPL CNDRFVAVVP KHSPLASRAQ
VSWKELLTLD FITLQRPSAV RLLLEQTLAK SGRTLEVAFE SHQLVTVGRM VANGLGASAV
PALCEQQMGE LGATCVPLFG PVIERRVGLI RLAQHRLSSA AQALAGVIER EMAMSGV
|
|---|
| |