Gene Spro_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0545 
SymbolpyrB 
ID5606811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp603055 
End bp603990 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content60% 
IMG OID640936052 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001476779 
Protein GI157368790 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACC CGCTGTATCA CAAACATATC ATCTCTATTA ACGATCTCAG CCGCGAGGAT 
CTGGAGCTGG TGCTGCGCAC CGCCGCCAGC CTGAAAGCCA ATCCGCAGCC CGAGCTGCTA
AAGCACAAGG TGATCGCCAG CTGCTTCTTT GAAGCCTCCA CCCGTACCCG CCTGTCGTTT
GAAACCTCGA TGCACCGTCT GGGCGCTTCG GTCGTGGGCT TTGCCGACGG CAGCAATACC
TCGCTCGGCA AGAAAGGCGA AACCCTGGCC GACACCATCT CGGTGATTGG TACCTACGTC
GATGCCATCG TGATGCGTCA CCCGCAGGAA GGCGCGGCGC GGCTGGCGAC CGAGTTCTCC
GGCGGCATTC CGGTGCTCAA CGCCGGTGAC GGTGCCAACC AGCACCCGAC CCAGACGCTG
CTCGACCTGT TCACCATTCA GGAAACCCAA GGCCGCCTGA ACAACATCAA TATCGCCATG
GTCGGCGACC TGAAATACGG CCGCACCGTA CACTCGCTGG CGCAGGCGCT GGCCAAGTTT
GAAGGCAACC GCTTCTTCTT CATCGCCCCG GACGCGCTGG CGATGCCGGC CTACATCCTG
CAGATGCTGG AAGAGAAAGG TATTCAATAC AGCCTGCACA GCAGCATTGA AGAAGTGGTG
CCGGAGCTGG ACATTCTCTA CATGACCCGG GTGCAGAAAG AGCGCCTGGA TCCTTCCGAA
TACGCCAACG TGAAGGCGCA GTTCGTACTG CGCGCGGCAG ATCTGGCCGG GGCACGTGAC
AACCTCAAGG TGCTGCACCC GCTGCCGCGC ATTGATGAGA TCACCACCGA CGTGGATAAA
ACGCCGTACG CCTACTACTT CCAGCAGGCG GGCAACGGTA TTTTCGCCCG TCAGGCGCTG
TTGGCGCTGG TATTAAACGC AGATTTGGCT CTTTAA
 
Protein sequence
MANPLYHKHI ISINDLSRED LELVLRTAAS LKANPQPELL KHKVIASCFF EASTRTRLSF 
ETSMHRLGAS VVGFADGSNT SLGKKGETLA DTISVIGTYV DAIVMRHPQE GAARLATEFS
GGIPVLNAGD GANQHPTQTL LDLFTIQETQ GRLNNINIAM VGDLKYGRTV HSLAQALAKF
EGNRFFFIAP DALAMPAYIL QMLEEKGIQY SLHSSIEEVV PELDILYMTR VQKERLDPSE
YANVKAQFVL RAADLAGARD NLKVLHPLPR IDEITTDVDK TPYAYYFQQA GNGIFARQAL
LALVLNADLA L