Gene Spro_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0421 
Symbol 
ID5602501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp468327 
End bp471674 
Gene Length3348 bp 
Protein Length1115 aa 
Translation table11 
GC content59% 
IMG OID640935925 
Producthypothetical protein 
Protein accessionYP_001476657 
Protein GI157368668 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.693078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000017841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGCCTGA TTATCACGCT ATTGCTCGGT TGTTTACTGT CTCAACCGGT GCTGGCCGCC 
GCGGTGCCTA CCGAAACACA GCTCAAGCAA GAGCTGAAGC AGGCGGAAGG CAACAAAAAC
GCGCCTAATC AGGCGGAAAC CACTGAGGCG CTGCAAAGCG CCCTCAACTG GTTATCGGAA
CGCAAAGAGT CGCTGACGCG TGTTGAGCAG TATCAGCGGG TGATTGACGA TTTCCCGAAG
ATGACGCAGG AACTGCGCCG TCAGTTGGTC ATTGAAGAAA GCAAGATCCT GCCGAATGGC
GACAACCTGC CGGCCAGCGA TCTGGAGCAG CAGATCCTGC AGACCAGCAG CCTGCTGTTG
GAACAGGCCC GTCTGCTGCA ACAGGAGCAG GAGCGAACGC GGGAAATCAG CGACTCTCTC
GGCCAATTGC CACAGCAGCA GACCGACGCT CGCCGGGCGC TGACGGAAGT GCAGCGCCGT
CTGCAGGCTC AACCCGCTAA CCCGACCACG CCACATGCTC AGGCCGCGCT GGCGCTATTA
CAAACCGAAG CCGCTGCGCG CAAGGCCAAA GTCGATGAAC TCGAGCTGGC ACAACTGTCG
GCCAATAATC GTCAGGAACT GGCGCGAATG CGCGCTGAGG TCTACAAAAA GCGCCACGAG
AAGATCGACA TCCAACTGCA GGCGCTGCGC AATAACCTCA ATGCCCAGCG GCAACGTGAA
GCCGAACTGG CACTGGAAAA AACCGAACAG TTGGCCGAGC AGAATGGTGA CCTGCCAAAA
AGCATCAGCC GGCAGCTACA GATCAACCGT GAGCTTTCCG CCGCGTTGAA CAATCAGGCC
CAGCGCATGG ATCTGATCTC ATCCCAACAA CGTCAGGCTG CCGCGCAAAC GCTGCAGGTG
CGCCAGGCAT TAAGCACCAT CATCGAACAG GCCCAATGGC TTGGCTCCTC GTCCGCACTG
GGAGAAACCC TGCGCGCCCA GGTGGCGACG CTGCCGGAAA TGCCCAAGCC ACAGCAGTTG
GACGGCGATA TGGCTCAGCT GCGTGTACAG CGGCTGCAGT TTGAAAGCCA ACTGGAGAAG
CTCTCACAGC GGGAGTTTAA ACGCGACGAC GGTAGTGAGC TGACCAGCGC GGAACGGCGT
ATCGTCGACG CCCAGTTACG TACCCAGCGT GAACTGCTCA ATTCACTGCT TTCCGGCTGC
GATACCCAAA TTCTCGAGCT GACCAAGCTG AAAGTGGCCA ACACCCAGCT GATTGAGGCC
CTGAACGAAA TCCGGGACGC CACCCACCGT TATCTGTTCT GGGTGCCGGA CATTAATCCG
ATCAACCTGT CCTACCCGAT TAACGTGGCG CACGATCTCA CTGTGTTACT GTCACTGGAT
ACGCTGTCAC AACTCGGCGG CGCCTTTATG ATGATGGTGA CCAGCAAGGA AACGCTAATC
CCGATTTTCG GTGCCCTGCT GCTGGTGATT TTCAGCATCA GTTCCCGCAA GCACTACCAC
GCCTTCCTGA CCCGTGCCAG CAGCCGGGTC GGCAAAGTTA CCCAGGATGA GTTTTTCCTG
ACGGTTCGCA CCGTGTTCTG GTCGATTCTG GTGGCGCTGC CACTGCCGGT GCTGTGGGCG
GCGCTCGGTT TTGGCCTGCA GAGTGCCTGG AACTATCCGG TAGCCGAAGC CATCGGCAAG
GGCGTCACCG CCACGCTGCC GATCTTGTGG GTCTGTATGA TCTGCGCCGC CTTTGCCCAC
CCCCAGGGGC TGTTTATCGT GCACTTCCGC TGGCCGGTGA AGCAGGTTTC ACGCGCCATG
CGTTACTACA AGATGTCGAT CTGGCTGATC GTGCCGCTGA TCATGGCGCT GATTACCTTC
GACAGCCTGA AAGAGCGCGA ATTTGCCAGC ACCCTCGGCC GGCTGTGCTT TATCTTGCTG
TGTCTGGCAT TGGCCCTGGT AACCAACAGC CTGAAACGTG CCGGTATCCC GCTGTATCTG
GACAAGAAAG GCTCCGGCGA GAACATGGTC AACACCGCGC TGTGGGGGCT GCTGCTGTCG
GCTCCGGTGC TGGCGGCGCT GGCCTCGGCC GTCGGTTACC TGACCACGGC GCAGGCGCTG
CTGGCGCGTC TGGAAACCTC GGTAGCCATC TGGTTCTTCC TGTTGGTGAT TTACCATATT
ATCCGTCGCT GGATGCTGAT CCAACGGCGC CGCATCGCCT TCGACCGCGC CAAGCAGCGC
CGCGCCGATA TCCTGGCGCA GCGCGCCAGA GGCGAAGAGG AAACGCCGCA TACGCCTAAC
AGTACCGAAG GCTCGATGGA CATGGATGAT TCGGAGATCG ATCTGGACAC CATCAGCGCC
CAGTCGCTGC GATTGGTGCG TTCGATCCTG ACCATGATCG CGCTGGTGTC GGTGATCGTC
CTGTGGTCGG AGATCCATTC CGCCTTCGCT TTCCTTGAAA ACATCACCCT GTGGAACGTC
AGCTCTACGG TTAACGGCGT GGATACCCCA CACCCCATCA CCCTGGGCGC GGTGCTGATC
GCCATTTTAG TGCTGATCGT CACCATGCAG TTGGTGCGTA ATCTACCGGC TCTGCTGGAG
CTGGCGGTGC TGCAGCATCT GGATCTGACG CCGGGTACCG GCTATGCCAT TACCACCATT
ACCAAGTACC TGCTGCTGCT GTTCGGCGCA GTACTGAGTT TTTCCTGGAT CGGTATTGAG
TGGTCGAAAC TGCAATGGGT AGTGACCGCG CTCAGCGTGG GGTTGGGCTT TGGTATGCAG
GAGATCTTCT CCAACTTTAT CTCCGGCCTG ATCATTTTGT TCGAAAAGCC GATCCGCATT
GGCGATACCG TGACGATCCG CAATCTGACC GGCAGCGTCA CCAAGATCAA CACCCGTGCC
ACCACCATTT CGGACTGGGA TCGCAAAGAG ATCATCGTGC CGAATAAGGC CTTTATCACC
GAACAGTTCA TTAACTGGTC GCTGTCGGAT AACCTGACCC GTGTGGTATT GACCGTGCCG
GCTCCTGGGG ATGCCAACAG CGAAGAGGTG ACCAAGATCC TGACCAACGC TGCCGAACGC
TGTTCACTGG TGCTCGATAC CCCCGCACCA GAGGTGTATT TGGTCGATCT GCAGCAGGGC
ATCCAGATCT TTGAGTTGCG TATCTATGCC GCCGAGATGG GCCACCGCAT GCCGCTACGC
CACGAGATCC ATCAGTTGAT TCTGGACGGT TATCGCGAGC ACGGCATTAC GCTGCCATAC
CCACCGTTCC AGGTACGCAG CGAGACGCTC TCACGCCTGA CCAGCAATGG CCGCACACCG
CCGTCCACCC CGCCGCCGAA CACCAAACGC GAATCAGGCA GTCTGTAA
 
Protein sequence
MRLIITLLLG CLLSQPVLAA AVPTETQLKQ ELKQAEGNKN APNQAETTEA LQSALNWLSE 
RKESLTRVEQ YQRVIDDFPK MTQELRRQLV IEESKILPNG DNLPASDLEQ QILQTSSLLL
EQARLLQQEQ ERTREISDSL GQLPQQQTDA RRALTEVQRR LQAQPANPTT PHAQAALALL
QTEAAARKAK VDELELAQLS ANNRQELARM RAEVYKKRHE KIDIQLQALR NNLNAQRQRE
AELALEKTEQ LAEQNGDLPK SISRQLQINR ELSAALNNQA QRMDLISSQQ RQAAAQTLQV
RQALSTIIEQ AQWLGSSSAL GETLRAQVAT LPEMPKPQQL DGDMAQLRVQ RLQFESQLEK
LSQREFKRDD GSELTSAERR IVDAQLRTQR ELLNSLLSGC DTQILELTKL KVANTQLIEA
LNEIRDATHR YLFWVPDINP INLSYPINVA HDLTVLLSLD TLSQLGGAFM MMVTSKETLI
PIFGALLLVI FSISSRKHYH AFLTRASSRV GKVTQDEFFL TVRTVFWSIL VALPLPVLWA
ALGFGLQSAW NYPVAEAIGK GVTATLPILW VCMICAAFAH PQGLFIVHFR WPVKQVSRAM
RYYKMSIWLI VPLIMALITF DSLKEREFAS TLGRLCFILL CLALALVTNS LKRAGIPLYL
DKKGSGENMV NTALWGLLLS APVLAALASA VGYLTTAQAL LARLETSVAI WFFLLVIYHI
IRRWMLIQRR RIAFDRAKQR RADILAQRAR GEEETPHTPN STEGSMDMDD SEIDLDTISA
QSLRLVRSIL TMIALVSVIV LWSEIHSAFA FLENITLWNV SSTVNGVDTP HPITLGAVLI
AILVLIVTMQ LVRNLPALLE LAVLQHLDLT PGTGYAITTI TKYLLLLFGA VLSFSWIGIE
WSKLQWVVTA LSVGLGFGMQ EIFSNFISGL IILFEKPIRI GDTVTIRNLT GSVTKINTRA
TTISDWDRKE IIVPNKAFIT EQFINWSLSD NLTRVVLTVP APGDANSEEV TKILTNAAER
CSLVLDTPAP EVYLVDLQQG IQIFELRIYA AEMGHRMPLR HEIHQLILDG YREHGITLPY
PPFQVRSETL SRLTSNGRTP PSTPPPNTKR ESGSL