Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0409 |
Symbol | |
ID | 5602689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 458487 |
End bp | 460133 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640935913 |
Product | chaperonin GroEL |
Protein accession | YP_001476645 |
Protein GI | 157368656 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00098113 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAGCTA AAGACGTAAA ATTCGGCAAT GACGCTCGCG TGAAAATGCT CCGCGGTGTG AATGTTCTCG CTGATGCAGT AAAAGTGACC CTGGGCCCGA AAGGCCGTAA CGTAGTGCTG GATAAATCCT TCGGCGCTCC TACCATCACT AAAGATGGCG TATCTGTTGC TCGTGAGATC GAACTGGAAG ACAAGTTCGA AAACATGGGT GCGCAGATGG TGAAAGAAGT TGCCTCTAAA GCGAACGACG CTGCGGGCGA CGGTACCACC ACTGCAACCG TACTGGCTCA ATCCATCATC ACCGAAGGCC TCAAAGCAGT GGCTGCCGGC ATGAACCCGA TGGATCTGAA GCGCGGTATC GACAAAGCGG TTATCGCCGC TGTTGAAGAA CTGAAAAAAC TGTCCGTACC TTGCTCCGAC TCCAAAGCCA TTGCTCAGGT AGGTACCATC TCTGCAAACT CCGACGAAAC CGTGGGTAAA CTGATTGCAG AAGCGATGGA AAAAGTGGGC AAAGAAGGCG TTATCACCGT TGAAGAAGGC ACCGGCCTGC AAGACGAGCT GGACGTTGTT GAAGGGATGC AGTTCGACCG CGGTTACCTG TCTCCGTACT TCATCAACAA GCCAGAAACC GGTTCTATCG AGCTGGAAAG CCCGTTCATC CTGCTGGCTG ACAAAAAAAT CTCCAACATC CGTGAAATGC TGCCAGTACT GGAAGCCGTG GCGAAAGCCG GCAAACCACT GCTGATCATT GCTGAAGATG TTGAAGGCGA AGCGCTGGCT ACCCTGGTGG TTAACACCAT GCGCGGCATC GTGAAAGTGG CTGCGGTTAA AGCACCTGGC TTCGGCGACC GTCGTAAAGC CATGCTGCAG GACATCGCTA CCCTGACTGG CGGTACCGTT ATCTCTGAAG AGATCGGCCT GGAGCTGGAA AAAACTACCC TGGAAGATCT GGGTACGGCC AAACGCATCG TTATCAACAA AGACACCACT ATCATCATCG ATGGCAATGG TGAAGAACCT GCGATTCAGG GCCGTGTGTC CCAGATCCGT CAGCAGATCG AAGAAGCAAC TTCTGATTAC GACCGTGAAA AACTGCAAGA GCGCGTAGCA AAACTGGCTG GCGGCGTTGC GGTAATCAAA GTCGGTGCTG CTACCGAAGT TGAAATGAAA GAGAAGAAAG CTCGCGTTGA AGATGCTCTG CACGCAACCC GTGCTGCAGT AGAAGAAGGC GTGGTTGCTG GTGGTGGTGT TGCACTGATT CGTGCAGCGT CCAAACTGAG CGAACTGCGT GGCGTGAACG AAGATCAGAA CGTGGGTATC AAAGTTGCGC TGCGCGCAAT GGAATCACCA CTGCGTCAGA TCGTTCTGAA CTGCGGCGAA GAGCCATCTG TTGTTGCCAA CACCGTGAAA GCGGGCGAAG GTAACTACGG TTACAACGCA GCAACTGAAG AATACGGCGA CATGATCGCG ATGGGTATCC TGGATCCAAC CAAAGTAACC CGTTCTGCTC TGCAGTACGC GGCTTCTGTG GCTGGCCTGA TGATCACCAC CGAGTGCATG GTAACCGACC TGCCAAAAGG CGACGCACCT GATTTAGGTG GCGCTGGCGG CATGGGTGGC ATGGGCGGCA TGGGCGGCAT GATGTAA
|
Protein sequence | MAAKDVKFGN DARVKMLRGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAREI ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQSII TEGLKAVAAG MNPMDLKRGI DKAVIAAVEE LKKLSVPCSD SKAIAQVGTI SANSDETVGK LIAEAMEKVG KEGVITVEEG TGLQDELDVV EGMQFDRGYL SPYFINKPET GSIELESPFI LLADKKISNI REMLPVLEAV AKAGKPLLII AEDVEGEALA TLVVNTMRGI VKVAAVKAPG FGDRRKAMLQ DIATLTGGTV ISEEIGLELE KTTLEDLGTA KRIVINKDTT IIIDGNGEEP AIQGRVSQIR QQIEEATSDY DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVAGGGVALI RAASKLSELR GVNEDQNVGI KVALRAMESP LRQIVLNCGE EPSVVANTVK AGEGNYGYNA ATEEYGDMIA MGILDPTKVT RSALQYAASV AGLMITTECM VTDLPKGDAP DLGGAGGMGG MGGMGGMM
|
| |