Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0288 |
Symbol | |
ID | 5607064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 330397 |
End bp | 331083 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640935787 |
Product | endonuclease V |
Protein accession | YP_001476526 |
Protein GI | 157368537 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.247957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0121274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAGATA CTCAAGCCCT GCGTGCAGAA CAACGGCTGC GCGCCTCCGA AGTCATTCGC CAGGATGATT TCCTGGTCGT TCCACCGGCC TTTATCGCCG GTGCCGACGT GGGCTTTGAG CAGGAGGGCG CGGTGACTCG CGCCGCTATC GCCATCCTGC GCTATCCGTC GCTGGAGCTG GTGGAATACC AGGTGGCACG AGTGGCCACC ACCATGCCCT ATATCCCCGG TTTCTTATCG TTCCGTGAAT ACCCAGCGTT GCTCGCAGCC TGGGAGCAAC TGCATCAAAA GCCGGATCTG GTGCTGGTTG ACGGCCATGG CATTTCGCAT CCGCGCCGTC TGGGCGTAGC CAGCCATTTT GGCCTGCTGG TCAACGTGCC GACCATTGGC GTAGCCAAAA AGCGCCTGTG CGGTAAGTTC GCCCCGCTGG ACGAGGCTAC AGATGCGCTG GCACCGCTGG AGGACAAAGG CGAGCAACTG GGTTGGGTAT GGCGCAGTAA GGCGCGCTGT AATCCGTTGT TTATCTCCAC CGGCCATCGC GTTGGCGCCG ACAGTGCACT GGCGTGGGTG CAACGTTGCA TGGCGGGCTA CCGTTTGCCG GAGCCTACAC GCTGGGCCGA CGCCATCGCC TCGCGCCGCC CGGCCTTCCA GCGCTGGCTG CAGCAGCATC CAGAGGTGTC GCAATGA
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Protein sequence | MIDTQALRAE QRLRASEVIR QDDFLVVPPA FIAGADVGFE QEGAVTRAAI AILRYPSLEL VEYQVARVAT TMPYIPGFLS FREYPALLAA WEQLHQKPDL VLVDGHGISH PRRLGVASHF GLLVNVPTIG VAKKRLCGKF APLDEATDAL APLEDKGEQL GWVWRSKARC NPLFISTGHR VGADSALAWV QRCMAGYRLP EPTRWADAIA SRRPAFQRWL QQHPEVSQ
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