| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0277 |
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| Symbol | rpoB |
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| ID | 5606964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 313487 |
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| End bp | 317515 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640935776 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001476515 |
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| Protein GI | 157368526 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.274525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0126314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTACT CCTATACCGA GAAAAAACGT ATTCGTAAGG ATTTTGGTAA GCGTCCACAA
GTTTTGGACA TACCATATCT CCTTTCTATC CAGCTTGATT CGTTCCAGAA GTTTATCGAG
CAAGATCCAG AAGGGCAGCA CGGCCTAGAA GCCGCCTTCC GTTCTGTTTT CCCTATCCAG
AGCTACAGTG GCAATTCGGA GCTGCAATAC GTTAGCTACC GTCTTGGTGA GCCGGTCTTC
GACGTCAAAG AGTGCCAGAT CCGTGGTGTG ACGTTCTCTG CACCGCTGCG CGTAAAACTG
CGCCTGGTAA TCTATGAGCG CGAAGCTCCG GAAGGCACGG TCAAAGACAT CAAGGAACAA
GAAGTCTATA TGGGCGAAAT TCCGCTCATG ACCGAAAACG GCACCTTTGT GATCAACGGT
ACTGAGAGGG TTATCGTATC TCAGCTTCAC CGTAGTCCTG GCGTATTCTT TGACAGCGAT
AAGGGTAAAA CCCACTCTTC GGGTAAAGTG CTGTATAACG CACGTATCAT CCCTTACCGC
GGTTCATGGC TGGATTTCGA GTTTGACCCG AAAGACAACC TGTTTGTGCG TATTGACCGT
CGCCGTAAAT TGCCTGCGAC CATCATTCTG CGTGCATTGA ACTACACCAC TGAGCAGATC
CTTGACCTGT TCTTTGCGAA AGTAGTTTAC GAGATCCGTG ATAACAAGCT GCAGATGGAG
CTGGTTCCAG AACGTCTGCG TGGTGAGACT GCTTCGTTTG ATATCGAAGC CAACGGCAAG
ATCTACATTG AGAAAGGCCG TCGTATCACC GCTCGTCATA TCCGTCAGCT CGAAAAAGAC
GAAATTCAGA GTATTGAAGT ACCGGTTGAG TACATCGCGG GCAAAGTGGT CGCGAAGGAC
TATATCGATA CCAATACCGG TGAGCTGATC TGCGCAGCCA ACATGGAGCT GTCGCTGGAT
CTGCTGGCCA AACTGAGCCA GTCAGGCCAC AAGCGTATCG AAACGCTGTT CACCAACGAT
CTGGACCACG GTGCGTACAT CTCTGAGACT GTACGTGTCG ATCCAACCAG CGATCGTTTG
AGCGCACTGG TAGAAATCTA CCGCATGATG CGTCCTGGTG AGCCGCCAAC GCGCGAAGCT
GCTGAAAACC TGTTTGAGAA CTTGTTCTTC TCTGAAGACC GCTACGATCT GTCTGCGGTT
GGTCGTATGA AGTTCAACCG TTCTCTGCTG CGTGACGAGA TCGAAGGTTC GGGCATCCTG
AGCAAAGACG ACATCATTGA AGTGATGAAG AAGCTCATCG GTATCCGTAA CGGTAAAGGC
GAAGTGGACG ATATCGACCA CTTGGGCAAC CGTCGTATCC GTTCCGTCGG CGAAATGGCT
GAGAACCAGT TCCGTGTAGG TCTGGTGCGT GTTGAGCGTG CGGTTAAAGA ACGTCTGTCC
CTGGGCGATC TGGACACCCT GATGCCACAG GACATGATCA ACGCCAAGCC GATTTCGGCG
GCGGTGAAAG AGTTCTTCGG CTCCAGCCAG CTGTCTCAGT TTATGGACCA GAACAACCCG
TTGTCCGAGA TTACGCACAA ACGTCGTATC TCTGCATTGG GCCCAGGCGG TCTGACCCGT
GAACGTGCCG GCTTTGAAGT TCGAGACGTA CACCCGACTC ACTACGGTCG CGTGTGCCCA
ATCGAAACGC CGGAAGGTCC AAACATCGGT CTGATCAACT CCTTGTCCGT GTACGCACAG
ACCAACGAGT ATGGCTTCCT GGAAACTCCG TACCGCCGCG TGCGTGACGG CCTGGTTACC
GATGAAATCA ACTATCTGTC TGCTATTGAA GAAGGCAACT TCGTTATCGC TCAGGCGAAC
TCCAACCTGG ATGATGACGG CCGCTTCGTA GAAGACCTGG TCACCTGTCG TAGCAAAGGC
GAATCAAGCC TGTTCAGCCG CGACCAGGTT GACTATATGG ACGTATCAAC CCAGCAGGTT
GTCTCCGTTG GTGCTTCACT GATTCCATTC CTGGAACACG ATGACGCCAA CCGTGCATTG
ATGGGTGCGA ACATGCAACG TCAGGCGGTT CCAACCTTGC GTGCTGACAA GCCGCTGGTA
GGTACCGGTA TGGAACGTGC TGTAGCTGTT GACTCCGGTG TTACTGCCGT AGCTCGACGT
GGCGGTGTGA TCCAGTACGT GGATGCTTCC CGTATCGTTA TTAAAGTTAA CGAAGACGAG
ATGCTCGCGG GCGAAGCAGG TATCGATATT TATAACCTGA CCAAGTACAC CCGTTCTAAC
CAGAACACCT GTATCAACCA GATGCCGTGT GTGAATCTGG GTGAGCCAAT CGAGCGCGGC
GACGTGCTGG CAGATGGCCC ATCCACTGAC CTGGGTGAAC TGGCGCTGGG CCAGAACATG
CGCGTGGCAT TCATGCCATG GAACGGCTAC AACTTCGAAG ACTCCATCTT GGTGTCCGAG
CGTGTCGTTC AGGAAGATCG CTTCACTACC ATCCACATCC AGGAACTGGC ATGTGTGTCT
CGCGACACCA AGTTGGGGCC TGAAGAGATC ACTGCCGACA TCCCTAACGT GGGTGAAGCT
GCGCTCTCCA AACTGGATGA GTCCGGTATC GTGTATATCG GTGCTGAAGT GACCGGTGGC
GACATTCTGG TTGGTAAGGT AACACCAAAA GGTGAAACCC AGCTGACGCC AGAAGAGAAG
CTGCTGCGTG CGATCTTCGG TGAGAAGGCG TCTGACGTTA AAGACTCCTC TCTGCGCGTA
CCAAACGGCG TTTCCGGTAC GATTATCGAC GTGCAGGTCT TTACCCGCGA TGGCGTGGAA
AAAGACAAGC GTGCGTTGGA AATCGAAGAG ATGCAGCTGA AGCAGGCGAA AAAAGACCTG
ACTGAAGAAC TGCAGATCCT GGAAGCTGGT CTGTTCGCAC GTATCCATGC GGTGCTGGTT
GCCGGCGGTG TTGAAGCTGA AAAGCTGAGC AAACTGCCAC GCGATCGCTG GCTGGAACTG
GGCCTGACCG ACGAAGAAAA GCAAAACCAG CTGGAACAGT TGGCAGAGCA GTACGACGAG
CTGAAATCCG ACTTCGAGAA GAAGCTGGAT GCCAAGCGTC GTAAGATCAC CCAGGGCGAT
GATCTGGCAC CAGGCGTGCT GAAAATCGTT AAGGTTTATC TGGCTGTTAA GCGTCAGATC
CAACCGGGTG ACAAGATGGC AGGCCGCCAC GGTAACAAGG GTGTTATCTC CAAGATCAAC
CCGATCGAAG ATATGCCTTA CGATGAAAAC GGCACGCCGG TTGACATCGT ACTGAACCCG
TTGGGCGTAC CATCACGTAT GAACATCGGT CAGATCCTGG AAACCCACTT GGGTATGGCT
GCGAAAGGCA TTGGTGAGAA GATCAACCAA ATGCTGAAGC AGCATCAGGA AGTGGCCAAG
CTGCGTGAGT TCATTCAGAA GGCTTACGAT CTGGGCGACG ATGTCTGCCA GAAAGTTGAC
CTGAACACCT TCACCGACGA CGAAGTACTG CGTCTGGCAG AGAACCTGAA AAAAGGTATG
CCAATCGCAA CGCCGGTGTT TGATGGTGCG AAAGAGAGTG AAATCAAGCA ATTGCTGGAA
ATGGGCGGGA TCCCAACTTC GGGTCAGATT ACGCTGTTCG ATGGCCGTAC CGGTGAGCAA
TTTGAGCGCC AGGTTACCGT TGGCTATATG TACATGCTGA AACTGAACCA CTTGGTTGAC
GATAAAATGC ACGCCCGTTC AACCGGTTCT TACAGCTTGG TTACTCAGCA GCCGCTGGGT
GGTAAGGCGC AGTTCGGTGG TCAACGCTTC GGTGAGATGG AAGTGTGGGC ACTGGAAGCA
TACGGCGCAG CTTATACCCT GCAGGAAATG CTCACCGTTA AGTCGGATGA CGTTAACGGC
CGTACCAAGA TGTACAAAAA CATCGTGGAT GGCGATCACC GCATGGAACC AGGCATGCCG
GAGTCCTTCA ACGTACTGTT GAAAGAAATC CGCTCGCTCG GTATCAACAT CGAACTGGAA
GGCGAGTAA
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| Protein sequence | MVYSYTEKKR IRKDFGKRPQ VLDIPYLLSI QLDSFQKFIE QDPEGQHGLE AAFRSVFPIQ
SYSGNSELQY VSYRLGEPVF DVKECQIRGV TFSAPLRVKL RLVIYEREAP EGTVKDIKEQ
EVYMGEIPLM TENGTFVING TERVIVSQLH RSPGVFFDSD KGKTHSSGKV LYNARIIPYR
GSWLDFEFDP KDNLFVRIDR RRKLPATIIL RALNYTTEQI LDLFFAKVVY EIRDNKLQME
LVPERLRGET ASFDIEANGK IYIEKGRRIT ARHIRQLEKD EIQSIEVPVE YIAGKVVAKD
YIDTNTGELI CAANMELSLD LLAKLSQSGH KRIETLFTND LDHGAYISET VRVDPTSDRL
SALVEIYRMM RPGEPPTREA AENLFENLFF SEDRYDLSAV GRMKFNRSLL RDEIEGSGIL
SKDDIIEVMK KLIGIRNGKG EVDDIDHLGN RRIRSVGEMA ENQFRVGLVR VERAVKERLS
LGDLDTLMPQ DMINAKPISA AVKEFFGSSQ LSQFMDQNNP LSEITHKRRI SALGPGGLTR
ERAGFEVRDV HPTHYGRVCP IETPEGPNIG LINSLSVYAQ TNEYGFLETP YRRVRDGLVT
DEINYLSAIE EGNFVIAQAN SNLDDDGRFV EDLVTCRSKG ESSLFSRDQV DYMDVSTQQV
VSVGASLIPF LEHDDANRAL MGANMQRQAV PTLRADKPLV GTGMERAVAV DSGVTAVARR
GGVIQYVDAS RIVIKVNEDE MLAGEAGIDI YNLTKYTRSN QNTCINQMPC VNLGEPIERG
DVLADGPSTD LGELALGQNM RVAFMPWNGY NFEDSILVSE RVVQEDRFTT IHIQELACVS
RDTKLGPEEI TADIPNVGEA ALSKLDESGI VYIGAEVTGG DILVGKVTPK GETQLTPEEK
LLRAIFGEKA SDVKDSSLRV PNGVSGTIID VQVFTRDGVE KDKRALEIEE MQLKQAKKDL
TEELQILEAG LFARIHAVLV AGGVEAEKLS KLPRDRWLEL GLTDEEKQNQ LEQLAEQYDE
LKSDFEKKLD AKRRKITQGD DLAPGVLKIV KVYLAVKRQI QPGDKMAGRH GNKGVISKIN
PIEDMPYDEN GTPVDIVLNP LGVPSRMNIG QILETHLGMA AKGIGEKINQ MLKQHQEVAK
LREFIQKAYD LGDDVCQKVD LNTFTDDEVL RLAENLKKGM PIATPVFDGA KESEIKQLLE
MGGIPTSGQI TLFDGRTGEQ FERQVTVGYM YMLKLNHLVD DKMHARSTGS YSLVTQQPLG
GKAQFGGQRF GEMEVWALEA YGAAYTLQEM LTVKSDDVNG RTKMYKNIVD GDHRMEPGMP
ESFNVLLKEI RSLGINIELE GE
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