| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0268 |
|---|
| Symbol | |
|---|
| ID | 5606782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 305170 |
|---|
| End bp | 306132 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640935763 |
|---|
| Product | biotin--protein ligase |
|---|
| Protein accession | YP_001476506 |
|---|
| Protein GI | 157368517 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0393829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0050705 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA CCAAAGTTCC CCTTAAGCTC ATTTCTATAC TGGCTGATGG CGATTTCCAT
TCTGGTGAGC ATCTTGGCGA GTTGCTGGGC ATGAGTCGTG CCGCTATTAA TAAACATATC
CAGACCATCC GGGAATGGGG TTTGGATGTG TTTACCGTGC CCGGCAAGGG CTATAGCCTG
CCGAGCCCGA TCCAGTTACT GGATGTTGAA TGTATTCTTG ACCAACTGGT TGATAAACGT
GTCACGGTGC TGCCGGTTGT GGACTCCACC AACCAATATT TGCTGGATCG TATTACCGAA
CTGCAATCTG GCGATGCCTG TGTTGCTGAG TACCAGCAGG CCGGTCGTGG CCGTCGCGGT
CGTCAATGGA TCTCACCATT TGGCGCCAAT CTGTATCTCT CCATGTTTTG GCGTCTGGAT
CAGGGGCCTG CAGCCGCAAT GGGGCTGAGT CTGGTGATTG GCATCGTGAT GGCCGAGGTG
CTCAAAGACC TTGGGGCACA AGATGTCAGG GTTAAATGGC CAAACGACTT ATACCTTAAC
GATCGCAAGT TAGCTGGTAT CTTGGTCGAA TTAACAGGAA AAACCGGTGA TGCGGCGCAA
CTGGTCATTG GTGCCGGTAT CAATTTGGCA ATGCGTGAAA CCAATGCCAA TGCGATTAAT
CAAGGCTGGA TAAACCTGCA AGAAGCGGGG ATTAATATCG ATCGTAATGA ATTGGCCGCC
ACCTTACTCA ATGAATTGCG TCAATCGCTG CGGCAATTTG AGATTGATGG TTTAGCGCCA
TTTATTGCGC GCTGGCGTGC TTTGGACAAC TTTATCGATC GGCCGGTTAA ACTGTTAATT
GGTGAACAAC AAATTTTTGG TATAGCACGA GGCATTGATC AACAAGGGGC ATTATTGCTC
GATCAGGACG GTGTGATTAA ACCGTTCATT GGTGGGGAAA TCTCTCTACG CAGCGCCGAG
TAA
|
|---|
| Protein sequence | MKDTKVPLKL ISILADGDFH SGEHLGELLG MSRAAINKHI QTIREWGLDV FTVPGKGYSL
PSPIQLLDVE CILDQLVDKR VTVLPVVDST NQYLLDRITE LQSGDACVAE YQQAGRGRRG
RQWISPFGAN LYLSMFWRLD QGPAAAMGLS LVIGIVMAEV LKDLGAQDVR VKWPNDLYLN
DRKLAGILVE LTGKTGDAAQ LVIGAGINLA MRETNANAIN QGWINLQEAG INIDRNELAA
TLLNELRQSL RQFEIDGLAP FIARWRALDN FIDRPVKLLI GEQQIFGIAR GIDQQGALLL
DQDGVIKPFI GGEISLRSAE
|
|---|
| |