Gene Spro_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0258 
Symbol 
ID5606610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp286781 
End bp288301 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content56% 
IMG OID640935749 
Product3-octaprenyl-4-hydroxybenzoate decarboxylase 
Protein accessionYP_001476496 
Protein GI157368507 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.13548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCT CACTGGCCGT TATAATGATC AGCATGAAAT ACCGTGACTT ACGCGATTTC 
CTCTCGTTGC TGGAAAAGAG AGGGGAACTA AAACGCATCA GCCAGCCGAT TGATCCCTAT
CTGGAAATGA CAGAAATTGC CGATCGTACT TTACGTGCGG GCGGCCCGGC GTTGCTGTTC
GAAAACCCGA AAGGGTACGA CATGCCGGTG CTGTGCAATC TGTTCGGTAC TCCTGGTCGC
GTAGCGATGG GGATGGGCCA GGAAGACGTC AGCTCGTTGC GCGAGGTCGG CAAGTTGCTG
GCGTTCCTTA AAGAGCCGGA GCCGCCAAAG GGCTTTCGCG ATCTGTTCGA TAAACTGCCG
AAGTTCAAGC AAGTGCTGAA CATGCCGACC AAGGTGTTGG GTTCAGCGCC TTGTCAGGAA
CAGGTATGGC AGGGGGATGA CGTCGATCTC AGCCGTATCC CGGTGATGCA CTGCTGGCCG
GAAGACGCCG CACCCTTGAT CACCTGGGGC CTGACCGTGA CCCGCGGGCC GCAAAAAGAG
CGGCAGAACC TGGGTATTTA TCGCCAACAG GTGCTGAGCA AGAATAAAGT CATCATGCGT
TGGCTGTCGC ACCGCGGCGG CGCGCTGGAT TACCAGGAAT GGTGCCAGGC GCATCCCGGT
GAGCGTTTCC CGGTTGCGGT TGCGCTGGGC GCAGATCCCG CCACCATTCT CGGCGCGGTC
ACGCCAGTGC CGGATACCCT GTCTGAATAT GCCTTTGCCG GGCTGCTGCG CGGCAACAAA
ACCGAAGTGG TCAAGTGTAT CTCCTGCGAT CTGGAAGTGC CCGCCAGCGC GGAAATCGTA
TTGGAAGGCT ATATCGAGCC GGGTGAAATG GCGCCTGAAG GCCCGTATGG CGATCACACC
GGTTACTACA ACGAAATTGA CCACTTCCCG GTATTCACCA TCACCCACAT CACCCAGCGT
CGTGACGCCA TTTATCACTC GACCTATACC GGCCGTCCGC CGGATGAGCC GGCGGTGTTG
GGCGTGGCGC TCAATGAAGT CTTCGTTCCT ATCCTGCAAA AGCAGTTCCC GGAAATTGTC
GATTTCTATC TGCCGCCTGA GGGTTGCTCA TATCGCCTGG CAGTGGTGAC TATCAAGAAA
CAGTATGCCG GTCATGCCAA GCGCGTAATG ATGGGGGTCT GGTCGTTCCT GCGTCAGTTT
ATGTACACCA AGTTTGTGAT CGTCTGCGAT GATGACGTCA ACGCACGCGA CTGGAATGAT
GTGATTTGGG CGATCACCAC CCGAATGGAT CCGGCAAGGG ATACCGTTTT GGTGGAGAAT
ACGCCGATCG ATTATTTGGA CTTCGCCTCA CCGGTTTCCG GTTTGGGATC GAAGATGGGG
CTGGATGCCA CCAATAAATG GCCGGGTGAA ACCCAGCGCG AATGGGGCCG TCCGATTCAG
ATGGATGAAA AGGTGCGTGC GCGCGTCGAT GAAATCTGGG ATGAGCTCGC AATTTTCAGT
GACAGAGAAC CGACGCTTTA G
 
Protein sequence
MPFSLAVIMI SMKYRDLRDF LSLLEKRGEL KRISQPIDPY LEMTEIADRT LRAGGPALLF 
ENPKGYDMPV LCNLFGTPGR VAMGMGQEDV SSLREVGKLL AFLKEPEPPK GFRDLFDKLP
KFKQVLNMPT KVLGSAPCQE QVWQGDDVDL SRIPVMHCWP EDAAPLITWG LTVTRGPQKE
RQNLGIYRQQ VLSKNKVIMR WLSHRGGALD YQEWCQAHPG ERFPVAVALG ADPATILGAV
TPVPDTLSEY AFAGLLRGNK TEVVKCISCD LEVPASAEIV LEGYIEPGEM APEGPYGDHT
GYYNEIDHFP VFTITHITQR RDAIYHSTYT GRPPDEPAVL GVALNEVFVP ILQKQFPEIV
DFYLPPEGCS YRLAVVTIKK QYAGHAKRVM MGVWSFLRQF MYTKFVIVCD DDVNARDWND
VIWAITTRMD PARDTVLVEN TPIDYLDFAS PVSGLGSKMG LDATNKWPGE TQREWGRPIQ
MDEKVRARVD EIWDELAIFS DREPTL