Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0258 |
Symbol | |
ID | 5606610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 286781 |
End bp | 288301 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640935749 |
Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
Protein accession | YP_001476496 |
Protein GI | 157368507 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.13548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTCT CACTGGCCGT TATAATGATC AGCATGAAAT ACCGTGACTT ACGCGATTTC CTCTCGTTGC TGGAAAAGAG AGGGGAACTA AAACGCATCA GCCAGCCGAT TGATCCCTAT CTGGAAATGA CAGAAATTGC CGATCGTACT TTACGTGCGG GCGGCCCGGC GTTGCTGTTC GAAAACCCGA AAGGGTACGA CATGCCGGTG CTGTGCAATC TGTTCGGTAC TCCTGGTCGC GTAGCGATGG GGATGGGCCA GGAAGACGTC AGCTCGTTGC GCGAGGTCGG CAAGTTGCTG GCGTTCCTTA AAGAGCCGGA GCCGCCAAAG GGCTTTCGCG ATCTGTTCGA TAAACTGCCG AAGTTCAAGC AAGTGCTGAA CATGCCGACC AAGGTGTTGG GTTCAGCGCC TTGTCAGGAA CAGGTATGGC AGGGGGATGA CGTCGATCTC AGCCGTATCC CGGTGATGCA CTGCTGGCCG GAAGACGCCG CACCCTTGAT CACCTGGGGC CTGACCGTGA CCCGCGGGCC GCAAAAAGAG CGGCAGAACC TGGGTATTTA TCGCCAACAG GTGCTGAGCA AGAATAAAGT CATCATGCGT TGGCTGTCGC ACCGCGGCGG CGCGCTGGAT TACCAGGAAT GGTGCCAGGC GCATCCCGGT GAGCGTTTCC CGGTTGCGGT TGCGCTGGGC GCAGATCCCG CCACCATTCT CGGCGCGGTC ACGCCAGTGC CGGATACCCT GTCTGAATAT GCCTTTGCCG GGCTGCTGCG CGGCAACAAA ACCGAAGTGG TCAAGTGTAT CTCCTGCGAT CTGGAAGTGC CCGCCAGCGC GGAAATCGTA TTGGAAGGCT ATATCGAGCC GGGTGAAATG GCGCCTGAAG GCCCGTATGG CGATCACACC GGTTACTACA ACGAAATTGA CCACTTCCCG GTATTCACCA TCACCCACAT CACCCAGCGT CGTGACGCCA TTTATCACTC GACCTATACC GGCCGTCCGC CGGATGAGCC GGCGGTGTTG GGCGTGGCGC TCAATGAAGT CTTCGTTCCT ATCCTGCAAA AGCAGTTCCC GGAAATTGTC GATTTCTATC TGCCGCCTGA GGGTTGCTCA TATCGCCTGG CAGTGGTGAC TATCAAGAAA CAGTATGCCG GTCATGCCAA GCGCGTAATG ATGGGGGTCT GGTCGTTCCT GCGTCAGTTT ATGTACACCA AGTTTGTGAT CGTCTGCGAT GATGACGTCA ACGCACGCGA CTGGAATGAT GTGATTTGGG CGATCACCAC CCGAATGGAT CCGGCAAGGG ATACCGTTTT GGTGGAGAAT ACGCCGATCG ATTATTTGGA CTTCGCCTCA CCGGTTTCCG GTTTGGGATC GAAGATGGGG CTGGATGCCA CCAATAAATG GCCGGGTGAA ACCCAGCGCG AATGGGGCCG TCCGATTCAG ATGGATGAAA AGGTGCGTGC GCGCGTCGAT GAAATCTGGG ATGAGCTCGC AATTTTCAGT GACAGAGAAC CGACGCTTTA G
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Protein sequence | MPFSLAVIMI SMKYRDLRDF LSLLEKRGEL KRISQPIDPY LEMTEIADRT LRAGGPALLF ENPKGYDMPV LCNLFGTPGR VAMGMGQEDV SSLREVGKLL AFLKEPEPPK GFRDLFDKLP KFKQVLNMPT KVLGSAPCQE QVWQGDDVDL SRIPVMHCWP EDAAPLITWG LTVTRGPQKE RQNLGIYRQQ VLSKNKVIMR WLSHRGGALD YQEWCQAHPG ERFPVAVALG ADPATILGAV TPVPDTLSEY AFAGLLRGNK TEVVKCISCD LEVPASAEIV LEGYIEPGEM APEGPYGDHT GYYNEIDHFP VFTITHITQR RDAIYHSTYT GRPPDEPAVL GVALNEVFVP ILQKQFPEIV DFYLPPEGCS YRLAVVTIKK QYAGHAKRVM MGVWSFLRQF MYTKFVIVCD DDVNARDWND VIWAITTRMD PARDTVLVEN TPIDYLDFAS PVSGLGSKMG LDATNKWPGE TQREWGRPIQ MDEKVRARVD EIWDELAIFS DREPTL
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