Gene Spro_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0253 
Symbol 
ID5606602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp282569 
End bp283339 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content53% 
IMG OID640935744 
Producttwin-arginine protein translocation system subunit TatC 
Protein accessionYP_001476491 
Protein GI157368502 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.3231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTG AAGATACCCA ACCCCTTATC AGTCACCTGA TAGAACTGCG TAAGCGGTTG 
TTAAACTCGA TTATCAGCAT ACTGGCGATC TTCCTGGTGC TGGTTTTTTT CGCCAATGAT
ATTTACCAAC TGGTGTCAGC ACCGCTGATC AAGCAGTTGC CCGCCGGGGC GAGCATGATC
GCCACCGACG TGGCTTCACC GTTCTTTACC CCGATCAAAT TGACCATGAT CGTCTCGGTG
TTTGTGTCTG CTCCGGTGAT CCTGTATCAG GTGTGGTCCT TCATCGCACC GGCGTTATAC
AAGCATGAAC GCCGCCTGAT GATGCCTTTA CTGGTCTCCA GCAGCCTGCT GTTTTATCTC
GGCATGGCGT TTGCCTACTT TATCGTTTTC CCGCTGGCGT TCGGCTTTTT TGCCAAGACC
GCACCGGCCG GGGTAATGAT AGCGACCGAC ATTAATAACT ATCTCGATTT CGTCATGGCG
CTATTTATGG CGTTTGGCGT GGCGTTTGAG GTGCCGGTTG CCATTATTCT GCTGTGCTGG
AGTGGCGTCA CTTCACCGGA AGATCTGAAA AAGAAACGAC CTTATGTTCT GGTCGGCGCT
TTCGTGGTCG GTATGCTGTT GACCCCGCCG GATGTGTTCT CGCAAACCCT GCTGGCGATC
CCGATGTATC TGCTGTTTGA AGTGGGCGTG TTCTTTGCCC GCTTCTACAC CGGTAAGCGT
CGTCCGCAGC CAGAAGAAGA AGACGAGGGT GACGAACCCC CGGCACCTTA A
 
Protein sequence
MAVEDTQPLI SHLIELRKRL LNSIISILAI FLVLVFFAND IYQLVSAPLI KQLPAGASMI 
ATDVASPFFT PIKLTMIVSV FVSAPVILYQ VWSFIAPALY KHERRLMMPL LVSSSLLFYL
GMAFAYFIVF PLAFGFFAKT APAGVMIATD INNYLDFVMA LFMAFGVAFE VPVAIILLCW
SGVTSPEDLK KKRPYVLVGA FVVGMLLTPP DVFSQTLLAI PMYLLFEVGV FFARFYTGKR
RPQPEEEDEG DEPPAP