| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0193 |
|---|
| Symbol | |
|---|
| ID | 5605585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 216939 |
|---|
| End bp | 218783 |
|---|
| Gene Length | 1845 bp |
|---|
| Protein Length | 614 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640935684 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_001476431 |
|---|
| Protein GI | 157368442 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.486098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.649708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAGT GTGTGTCAAC CGCAGCAGTG ATAAACAAAG AGTTGCTGGC CGAGCAGGTA
TTACGCGATA CCTTCGGCTA CCAGCAATTC CGACCGGGTC AACAAACGAT TATCAACACG
GCGATCGGCG GGCAGGATTG CCTGGTGGTC ATGCCGACCG GTGGCGGTAA ATCGTTGTGT
TACCAAATCC CGGCGCTGGT GATGGATGGC CTGACGTTAG TGGTTTCCCC GTTGATCTCG
CTGATGAAAG ATCAGGTTGA TCAGTTACTG GCCTATGGCG TCGCCGCTGC CTGCTATAAC
TCAACGCAGA CGCGTGAGCA GCAGCTCGAG GTGATGGCGG GTTGCCGCAG CGGCCAGATC
AAAATGCTGT ATATCGCCCC CGAGCGGCTG ATGATGGACA GTTTCCTCGA TCAGCTCGGC
GGCAACCCAC CTGCCTTACT GGCGGTGGAT GAAGCGCACT GTATTTCGCA GTGGGGTCAT
GATTTCCGGC CTGAATACCG TGCATTGGGG CTGTTGAAGC AACGCTTCCC TGATATGCCG
GTGATTGCGT TGACCGCGAC CGCCGACGAA TCCACCCGTG GTGACATAGT TCGCCTGCTG
GCATTGCAGG ATCCGCTGGT GCAGGTCAGC AGTTTTGACC GGCCAAACAT CCGCTATACG
CTGGTGGAGA AATTCAAGCC GCTCGACCAA TTGTGGCGCT TCGTGCAGGA CCAACGTGGC
AAAAGCGGCA TCATTTACTG CAACAGCCGC GCCAAGGTCG AAGACACCAC TGCCCGCCTG
CAAAGCCGTG GGCTGAGCGT GGGAGCCTAT CATGCCGGGT TGGACAACGA CCGCCGCGCG
CAGGTGCAGG AAGCGTTCCA GCGCGACGAT TTGCAGGTAG TGGTCGCCAC CGTCGCCTTT
GGCATGGGCA TTAACAAACC CAACGTGCGC TTTGTGGTGC ACTTTGATAT TCCGCGCAAT
ATCGAATCTT ATTATCAGGA AACCGGCCGT GCCGGGCGTG ACGGCTTACC GGCCGAGGCG
ATCCTGCTGT ATGACCCGGC CGATATGGCC TGGCTGCGCC GCTGTCTGGA GGAAAAGCCC
GCCGGACAGC AACTGGATAT CGAGCGCCAC AAGTTGAACG CCATGGGGGC TTTCGCCGAA
GCGCAGACCT GCCGCCGCTT GGTGCTGCTC AACTATTTTG GCGAAGGTAA ACACCAGAAC
TGCGGCAACT GCGATATCTG CCTGGATCCT CCCAAGCGTT ACGATGGGCT GGAAGATGCG
CGCAAGGCGT TGTCCTGTGT GTATCGCGTC GGCCAGCGTT TCGGGCTGGG ATACATTGTC
GAGGTACTGC GCGGTTCCAA TAACCAGCGT ATCCGCGAAT ACGGACATGA GAAACTGCCG
GTGTACGGCA TTGGTCGCGA GCAGACCACC GAACACTGGA CCAGCGTGCT GCGTCAGTTG
ATCCACCTGG GCTTTATCAC CCAGAACATT GCCATGCACT CGGCGCTGCA ACTGACCGAG
GCCGCGCGCC CGGTGCTGCG GGGTGAGCTG GAACTGCAAT TGGCGGTACC GCGCATCCAG
AGCCTGAAGG CCCGCAGCAG CAGTAACCAA AAGTCCTACG GCGGCAATTA CGATCGCAAA
CTGTTTGCCA AATTGCGCAA GTTGCGAAAA TCGATTGCCG ACGAAGAAAA TATCCCGCCT
TATGTGGTGT TTAACGATGC CACCTTGTTG GAAATGGCGG AGCAGATGCC TATCAAGGCC
GGCGACCTGT TAAGCGTTAA CGGTGTCGGT CAGCGCAAGC TGGAGCGTTT TGGCGCGCCG
TTTATGGCGA TGATCCGCGA TCACCTCGAT AATGACGAAG ATTAA
|
|---|
| Protein sequence | MGKCVSTAAV INKELLAEQV LRDTFGYQQF RPGQQTIINT AIGGQDCLVV MPTGGGKSLC
YQIPALVMDG LTLVVSPLIS LMKDQVDQLL AYGVAAACYN STQTREQQLE VMAGCRSGQI
KMLYIAPERL MMDSFLDQLG GNPPALLAVD EAHCISQWGH DFRPEYRALG LLKQRFPDMP
VIALTATADE STRGDIVRLL ALQDPLVQVS SFDRPNIRYT LVEKFKPLDQ LWRFVQDQRG
KSGIIYCNSR AKVEDTTARL QSRGLSVGAY HAGLDNDRRA QVQEAFQRDD LQVVVATVAF
GMGINKPNVR FVVHFDIPRN IESYYQETGR AGRDGLPAEA ILLYDPADMA WLRRCLEEKP
AGQQLDIERH KLNAMGAFAE AQTCRRLVLL NYFGEGKHQN CGNCDICLDP PKRYDGLEDA
RKALSCVYRV GQRFGLGYIV EVLRGSNNQR IREYGHEKLP VYGIGREQTT EHWTSVLRQL
IHLGFITQNI AMHSALQLTE AARPVLRGEL ELQLAVPRIQ SLKARSSSNQ KSYGGNYDRK
LFAKLRKLRK SIADEENIPP YVVFNDATLL EMAEQMPIKA GDLLSVNGVG QRKLERFGAP
FMAMIRDHLD NDED
|
|---|
| |