| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0182 |
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| Symbol | dapF |
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| ID | 5605411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 205915 |
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| End bp | 206739 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640935673 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001476420 |
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| Protein GI | 157368431 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.998768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCT CCAAAATGCA CGGTCTGGGC AACGACTTTA TGGTGGTCGA TGCCGTTACA
CAGAATGTCT ATTTTTCACC CGAGCTGATC CGCCGTTTGG CCGATCGGCA CCTGGGCGTT
GGCTTTGACC AGCTGCTGGT GGTAGAACCG CCTTACGATC CGGAACTGGA TTTCCACTAC
CGCATTTTTA ACGCCGACGG CAGTGAAGTG GCGCAGTGTG GCAACGGCGC TCGCTGTTTT
GCCCGCTTTG TGCGGCTGAA AGGGCTGACC AACAAGCGCG ATATTCGCGT GAGCACCCAG
ACCGGACGTA TGGTGCTGAG TGTCACCGAT GACGATTTGG TGTGTGTGAA CATGGGCGAG
CCGAACTTTG ATCCACAGAC GGTGCCCTTT CGCGCGACCA AAGAAGAAAA GACTTACATC
ATGCGCGCGG CGGAACATAC GGTGCTGTGC GGCGTGGTGT CGATGGGCAA CCCACATTGT
GTTTTACAGG TGGATGATGT AAAAACCGCC AAGGTGGAAT TGCTCGGGCC GGTGCTGGAA
GGGCATGAGC GCTTCCCTGA ACGGGCCAAC ATTGGTTTTA TGCAAATTGT CAGCCGTGAG
CACATCAAAT TGCGCGTGTA TGAGCGCGGT GCCGGCGAAA CCCAGGCCTG CGGAAGCGGC
GCCTGTGCGG CAGTGGCAGT GGGGATCCAA CAGGAATTGC TGTCAGAAGA GGTGCATGTA
GAACTGCCGG GCGGCAGCCT GCATATTCGC TGGAAAGGAC CGGGCAGCCC GCTGTTTATG
ACCGGCCCGG CAACCCATGT ATATGACGGA TTTATTCATC TATGA
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| Protein sequence | MQFSKMHGLG NDFMVVDAVT QNVYFSPELI RRLADRHLGV GFDQLLVVEP PYDPELDFHY
RIFNADGSEV AQCGNGARCF ARFVRLKGLT NKRDIRVSTQ TGRMVLSVTD DDLVCVNMGE
PNFDPQTVPF RATKEEKTYI MRAAEHTVLC GVVSMGNPHC VLQVDDVKTA KVELLGPVLE
GHERFPERAN IGFMQIVSRE HIKLRVYERG AGETQACGSG ACAAVAVGIQ QELLSEEVHV
ELPGGSLHIR WKGPGSPLFM TGPATHVYDG FIHL
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