Gene Spro_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0178 
SymbolhemC 
ID5605368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp201395 
End bp202336 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID640935669 
Productporphobilinogen deaminase 
Protein accessionYP_001476416 
Protein GI157368427 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0266595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGACA AAATTATTCG AATTGCCACC CGACAAAGCC CACTCGCTCT CTGGCAGGCA 
CATTATGTGC AGCAGCGCCT GATGGCCAAC CACCCTGGCC TGCAGGTTGA ACTGGTGCCA
ATGGTCACTA AGGGCGACAT TATTCTGGAT ACGCCACTGG CGAAGGTCGG TGGTAAAGGG
CTGTTTGTTA AGGAACTTGA GCTGGCGTTA CTCGATGGCC GTGCCGATAT CGCCGTCCAT
TCGATGAAAG ACGTCCCGGT AGATTTCCCC GCCGGCCTGG GTTTGGTGAC CATTTGCGAG
CGCGACGATC CACGCGACGC ATTTGTATCC AATCGTTTCA CCTCGCTCGA TCAACTGCCG
CAGGGCAGCG TGGTTGGCAC CTCCAGCCTG CGCCGCCAGT GCCAGTTACG TGAGCGTCGT
CCGGACCTGA TCGTGCGCGA TCTGCGCGGC AACGTTGGCA CCCGTTTGTC AAAACTGGAC
AACGGTGATT ACGACGCCAT TATTCTGGCG GTCGCCGGGC TCAAGCGCCT GGGTCTGGAA
CAGCGCATCC GCAGCCCGCT TAGCCCGGAA GAGTGCTTGC CGGCGGTCGG TCAGGGTGCT
GTGGGCATTG AGTGCCGCCT CGACGATGAA ACCACCCGTG CGCTACTGGC CCCGCTCAAT
CATGCCGTCA CCGAAACCCG CGTTCGTGCC GAACGTGCGA TGAATACCCG GTTGGAAGGC
GGTTGTCAGG TGCCGATCGG CAGCTATGCC GAACTCGATG GCGACAGCCT GTGGCTGCGT
GCATTGGTAG GCTCCCCGGA CGGCAGTCAG ATGGTGCGCG GCGAACGTCG CGGCCCGGCA
GCGCTGGCGG AACAAATGGG CATTGAGCTG GCGGAAGAGT TGCTGGCGCA GGGCGCACGC
GAAATTCTAC AGGATGTTTA TCAGGGAAAT CCTCCGGCAT GA
 
Protein sequence
MLDKIIRIAT RQSPLALWQA HYVQQRLMAN HPGLQVELVP MVTKGDIILD TPLAKVGGKG 
LFVKELELAL LDGRADIAVH SMKDVPVDFP AGLGLVTICE RDDPRDAFVS NRFTSLDQLP
QGSVVGTSSL RRQCQLRERR PDLIVRDLRG NVGTRLSKLD NGDYDAIILA VAGLKRLGLE
QRIRSPLSPE ECLPAVGQGA VGIECRLDDE TTRALLAPLN HAVTETRVRA ERAMNTRLEG
GCQVPIGSYA ELDGDSLWLR ALVGSPDGSQ MVRGERRGPA ALAEQMGIEL AEELLAQGAR
EILQDVYQGN PPA