Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0178 |
Symbol | hemC |
ID | 5605368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 201395 |
End bp | 202336 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640935669 |
Product | porphobilinogen deaminase |
Protein accession | YP_001476416 |
Protein GI | 157368427 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0266595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACA AAATTATTCG AATTGCCACC CGACAAAGCC CACTCGCTCT CTGGCAGGCA CATTATGTGC AGCAGCGCCT GATGGCCAAC CACCCTGGCC TGCAGGTTGA ACTGGTGCCA ATGGTCACTA AGGGCGACAT TATTCTGGAT ACGCCACTGG CGAAGGTCGG TGGTAAAGGG CTGTTTGTTA AGGAACTTGA GCTGGCGTTA CTCGATGGCC GTGCCGATAT CGCCGTCCAT TCGATGAAAG ACGTCCCGGT AGATTTCCCC GCCGGCCTGG GTTTGGTGAC CATTTGCGAG CGCGACGATC CACGCGACGC ATTTGTATCC AATCGTTTCA CCTCGCTCGA TCAACTGCCG CAGGGCAGCG TGGTTGGCAC CTCCAGCCTG CGCCGCCAGT GCCAGTTACG TGAGCGTCGT CCGGACCTGA TCGTGCGCGA TCTGCGCGGC AACGTTGGCA CCCGTTTGTC AAAACTGGAC AACGGTGATT ACGACGCCAT TATTCTGGCG GTCGCCGGGC TCAAGCGCCT GGGTCTGGAA CAGCGCATCC GCAGCCCGCT TAGCCCGGAA GAGTGCTTGC CGGCGGTCGG TCAGGGTGCT GTGGGCATTG AGTGCCGCCT CGACGATGAA ACCACCCGTG CGCTACTGGC CCCGCTCAAT CATGCCGTCA CCGAAACCCG CGTTCGTGCC GAACGTGCGA TGAATACCCG GTTGGAAGGC GGTTGTCAGG TGCCGATCGG CAGCTATGCC GAACTCGATG GCGACAGCCT GTGGCTGCGT GCATTGGTAG GCTCCCCGGA CGGCAGTCAG ATGGTGCGCG GCGAACGTCG CGGCCCGGCA GCGCTGGCGG AACAAATGGG CATTGAGCTG GCGGAAGAGT TGCTGGCGCA GGGCGCACGC GAAATTCTAC AGGATGTTTA TCAGGGAAAT CCTCCGGCAT GA
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Protein sequence | MLDKIIRIAT RQSPLALWQA HYVQQRLMAN HPGLQVELVP MVTKGDIILD TPLAKVGGKG LFVKELELAL LDGRADIAVH SMKDVPVDFP AGLGLVTICE RDDPRDAFVS NRFTSLDQLP QGSVVGTSSL RRQCQLRERR PDLIVRDLRG NVGTRLSKLD NGDYDAIILA VAGLKRLGLE QRIRSPLSPE ECLPAVGQGA VGIECRLDDE TTRALLAPLN HAVTETRVRA ERAMNTRLEG GCQVPIGSYA ELDGDSLWLR ALVGSPDGSQ MVRGERRGPA ALAEQMGIEL AEELLAQGAR EILQDVYQGN PPA
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