Gene Spro_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0087 
Symbol 
ID5603723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp91604 
End bp92533 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content59% 
IMG OID640935572 
Productformate dehydrogenase accessory protein FdhE 
Protein accessionYP_001476325 
Protein GI157368336 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC GCATTGTTCC TAAAGAGCAG TTAGGGGCAC AGCGTGAGAA GTCCACAACG 
GCGGAAACCA TCCCGCCGTT ACTTTTCGCG AATCTGAAAA GCCTTTACAG CCGCCGTGCT
GAACGCCTGC GCAAGCTGGC GACCGACAAC CCGCTGGGCG ACTACCTGAA CTTCGCCGCC
CAACTGGCCG AGGCGCAGCA TCACGCGCTG CACGACAACC CGCTGACGTT GGATCTGACC
GAAGAGTTGC AGCAGGGCGC AGCCAGCGGA AAACCACCGC TGGATCTGAG CGTTTTTCCG
CGCAGTGAAC ACTGGCACAA ACTGCTGGTT TCGCTGATTG CCGAGTTGCG CCCGCAGGCG
CCGGAGCACA TTCTGGCGGT GCTGGATAAC CTGGAAAAGG CCTCGTCGCA CGAACTGGAA
TTGCTGGCCG ACGCCTTGCT TAACCAGGAC TTCGGCAAGA TTGGCAGCGA GAAAGCGCCG
TTTATCTGGG CCGCGCTGTC GCTCTATTGG GCGCAGATGG CCGGTCTTAT CCCCGGCAAG
GCTCGCGCCG AATATGGCGA ACACCGCCAG TTCTGCCCGG TGTGCGGCAG TATTCCGGTT
TCCAGCGTGG TGCATATCGG CACCGTCAGC GGCCTGCGTT ATTTGCACTG CAACCTGTGC
GAAAGCGAAT GGCACGTAGT GCGAATCAAA TGCAGCAACT GCGAGCAGAC TCGTGACCTC
AACTACTGGT CGCTGGACAG CGAACTGGCA GCGGTAAAGG CGGAAAGTTG CGGTGACTGC
GGCACTTACC TGAAGATTTT ATATCAGGAA AAAGACCCGC AGGTTGAGGC GGTTGCCGAC
GATCTGGCCA CGCTGGTGCT CGACGCCAAA ATGGAAGATG AAGGCTTTGC CCGCAGCAGC
ATCAACCCGT TCCTGTTCCC GGGTTCGTAA
 
Protein sequence
MSIRIVPKEQ LGAQREKSTT AETIPPLLFA NLKSLYSRRA ERLRKLATDN PLGDYLNFAA 
QLAEAQHHAL HDNPLTLDLT EELQQGAASG KPPLDLSVFP RSEHWHKLLV SLIAELRPQA
PEHILAVLDN LEKASSHELE LLADALLNQD FGKIGSEKAP FIWAALSLYW AQMAGLIPGK
ARAEYGEHRQ FCPVCGSIPV SSVVHIGTVS GLRYLHCNLC ESEWHVVRIK CSNCEQTRDL
NYWSLDSELA AVKAESCGDC GTYLKILYQE KDPQVEAVAD DLATLVLDAK MEDEGFARSS
INPFLFPGS