Gene Spro_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0085 
Symbol 
ID5607160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp90073 
End bp90972 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content61% 
IMG OID640935570 
Productformate dehydrogenase, beta subunit 
Protein accessionYP_001476323 
Protein GI157368334 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC AATCTCAGGA CATCATTCGT AAATCCGCCA CCAATGGTTT CACGCCGGCG 
CCGCGCGCCC GTGACCACCA GGAGGAAGTG GCCAAACTGA TCGATGTCAC CACCTGTATC
GGCTGCAAGG CCTGTCAGGT GGCCTGTTCC GAATGGAACG ACATCCGCGA TGAAATCGGC
AGCAACGTCG GGGTGTACGA TAACCCCGCC GATCTGACCG CCAAGTCGTG GACGGTGATG
CGCTTTTCCG AGGTGGAGGA AAACGGCAAG CTGGAGTGGC TGATCCGCAA GGACGGCTGC
ATGCACTGCG CCGATCCGGG CTGCCTGAAG GCCTGCCCGT CGGAAGGAGC CATCATCCAG
TACGCCAACG GCATCGTCGA TTTCCAGTCC GAACACTGCA TCGGCTGCGG TTACTGCATC
GCCGGTTGCC CGTTCGATGT GCCGCGCATG AACAAGGACG ACAACCGGGT GTACAAGTGC
ACCCTGTGCG TCGATCGGGT TGATGTCGGC CAGGAACCGG CCTGTGTGAA GACCTGTCCG
ACCGGGGCCA TCCATTTCGG CACCAAGGAC GCCATGAAGG AAATCGCCGC CGAGCGCGTC
AGCGAGCTGA ACACCCGTGG TTATCAGAAC GCCGGTCTGT ACGATCCGGC GGGCGTGGGC
GGCACCCACG TGATGTATGT GCTGCACCAT GCCGACAAGC CGCAGCTGTA TCACGGTTTG
CCGGATAACC CGACCATCAG CCCGGCAATC ACGTTCTGGA AAGGCGTGTG GAAACCCCTG
GCGGCCATCG GCTTTGCCGC CACCTTTGCA GCGAGCGTGT TCCACTATGT CGGCGTCGGT
CCTAACCGCG TCGAAGAGGA AGACCACGAC GAGCTGCACG ATGAGGAGAC GCGCAAATGA
 
Protein sequence
MAMQSQDIIR KSATNGFTPA PRARDHQEEV AKLIDVTTCI GCKACQVACS EWNDIRDEIG 
SNVGVYDNPA DLTAKSWTVM RFSEVEENGK LEWLIRKDGC MHCADPGCLK ACPSEGAIIQ
YANGIVDFQS EHCIGCGYCI AGCPFDVPRM NKDDNRVYKC TLCVDRVDVG QEPACVKTCP
TGAIHFGTKD AMKEIAAERV SELNTRGYQN AGLYDPAGVG GTHVMYVLHH ADKPQLYHGL
PDNPTISPAI TFWKGVWKPL AAIGFAATFA ASVFHYVGVG PNRVEEEDHD ELHDEETRK