Gene Spro_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0082 
Symbol 
ID5603899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp86032 
End bp86868 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID640935567 
Productformate dehydrogenase accessory protein 
Protein accessionYP_001476320 
Protein GI157368331 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAATA TAAACCCAGA CCAACATATC AATGATATCA ATGAGACCTT GCTCACAGGG 
GTGACCCGGT CCCAGGTGTA TCAACGCGGG CAACTCGCCA CCGCACAGCA GGATTGGCTG
GCGGAAGAAG TCCCGGTCGC ACTGGTCTAT AACGGCATTT CTCACGTGGT GATGATGTGC
ACCCCCAAAG ATCTGGAGGC GTTCGCCCTG GGTTTTTCCC TGTCTGAAGG CATCATCGAG
TCACCGCGCG ATATTTACAG TATAGAGATT AACCAAACTT GTAACGGGCT GGAGGTGCAA
ATTGAGCTTT CCAGCCGTCG CTTTGCCGGT TTGAAAGAGC GCCGCCGTGC CATGGCGGGC
CGCACCGGCT GTGGCGTGTG CGGTATCGAG CAGTTGGCAG ATATTTTTCG CCCGCTGCCT
GCACTGCCGT TTACCCAGAC CTTTTCCCTC ACCAATCTTG ACTCTGCATT GAAACAACTG
CGAGAAGTGC AGAAAGTTGG GCAACTGACC GGTTGCACCC ATGCCGCCGC CTGGTTGTCG
CCACAAGGGG AATTACTCGG CGGGTGTGAA GATGTGGGCC GTCATGTCGC CCTGGATAAG
CTGCTCGGCG TACGCGCCAA ACAGGGCTGG CAGCAGGGTG CGGTATTAAC TTCCAGCCGC
GCCAGCTATG AAATGGTGCA AAAATCCGCC ATGTGCGGCG TCGAGATCCT GTTTGTGGTT
TCTGCCGCCA CCTCACTGGC AGTGGAAATC GCCGAGCGCA GCAACCTGAC GCTGGTCGGC
TTCAGCAAAC CCGGCCGTGC CACGGTGTTT ACCCATCCGC AGCGCATTGT GGATTAA
 
Protein sequence
MNNINPDQHI NDINETLLTG VTRSQVYQRG QLATAQQDWL AEEVPVALVY NGISHVVMMC 
TPKDLEAFAL GFSLSEGIIE SPRDIYSIEI NQTCNGLEVQ IELSSRRFAG LKERRRAMAG
RTGCGVCGIE QLADIFRPLP ALPFTQTFSL TNLDSALKQL REVQKVGQLT GCTHAAAWLS
PQGELLGGCE DVGRHVALDK LLGVRAKQGW QQGAVLTSSR ASYEMVQKSA MCGVEILFVV
SAATSLAVEI AERSNLTLVG FSKPGRATVF THPQRIVD