Gene Spro_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0066 
Symbol 
ID5602839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp67169 
End bp67915 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content37% 
IMG OID640935551 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001476304 
Protein GI157368315 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.961932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAATT CATTCTTCAA TGATGAAACC ATCAACACCA CCATAAAAAA TGATTTGGAA 
GGTAAACTTA GCGAGTATAG TAACGTGAAG TACGCTTATG CCATAATGAA TAAAAGAAAT
CCGGCGAACT TTGCGATTAT TTCGAACGGA ACTGAATGGT TTGAATTTTA TACAGAAAAT
AACTATCAAT TTATCGACCC GGTTCTTATT ACTGCTTCGC GCCGTATTAC TCCGTTCTCC
TGGGATGAAA ATATAATGAT TGATCCAGGG TTAAAATTGC CAAGAATTTT TGATATGGCT
AAGAATTACA ATGTAGTTAA TGGCTATACA TTTGTGCTGC ATGATCATAA TCATAATTTG
GTGGTGCTTT CTATTATGAT TGATAAAAAT TGCGACTATA ATATAGAAGA AAGAATAATA
GCCAACCAAG ACAAACTTCA AATGCTGCTA ATTACTACTC ATGATAAGCT CACTGCATTT
TACAAGGAAA TTAATAGCCC TACCTACTTT GACAAAATGA ACAATAAAGG AATATTCTCG
AAGCGAGAGA ATGAGATAAT TTACTGGGCA AGCATGGGTA AATCCTATCA GGAGATTGCG
CTCATCCTGG GGATCAAGCT CACCACAATA AAATATCATA TTGGTAATGC CGTCAAAAAA
TTAGGCGTTA CCAACGCCAA ACATGCTATC AGGCTAGGCG TTGAACTACA GCTGATCAGA
CCCGTGCTTC CTGACACGGA AGGTTAA
 
Protein sequence
MSNSFFNDET INTTIKNDLE GKLSEYSNVK YAYAIMNKRN PANFAIISNG TEWFEFYTEN 
NYQFIDPVLI TASRRITPFS WDENIMIDPG LKLPRIFDMA KNYNVVNGYT FVLHDHNHNL
VVLSIMIDKN CDYNIEERII ANQDKLQMLL ITTHDKLTAF YKEINSPTYF DKMNNKGIFS
KRENEIIYWA SMGKSYQEIA LILGIKLTTI KYHIGNAVKK LGVTNAKHAI RLGVELQLIR
PVLPDTEG