| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0065 |
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| Symbol | |
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| ID | 5607273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 64387 |
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| End bp | 66375 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640935550 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001476303 |
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| Protein GI | 157368314 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTAA AAATAACTCG TATGCCCCGC CCGGCGGTGC TTGCAGTGGC AATATTATGC
AGTATGACGA CCTCAGCGCT GGCCTACGAC CAACTCTACG TCTTCGGCGA CAGTCTGAGC
GACACCGGCA ACAATGGCCG CTTTACCTAC GACAGCAATA AACATCTGTT ATACGACGAA
GTGCTGGCGC AACGTATTGG TGCCGCGCTG GTGGCATCGG ATAACGGCGG TGACAACTAT
GCCGCGGGTG GTGGCGTGGC GGTACCGGCG CTTAACCCGG CGGATAACAC TCAGGATCAG
GTGCAGAGCT ACCTCAACCG GGTCAATGGC CGGGCCGATG GTGATGGGCT GTATATTCAC
TGGATTGGTG GCAACGACCT GGCGGCGGCG GCGTTAAATC CGACGACTGC GCCGGGTGTG
GCCTACAACA GTGCGGCCGC CGCTGCAGCG CAGGTTCACT CGTTGTTAAA TGCCGGTGCC
GGAACGGTGA TTGTCCCGAC GGTGCCGAAT ATTGGCTCTA CGCCGCAGCT GATGGAGCTG
ATTATCCAAC AGGCGCTGAC GCCGGTGCAA AACGCGGCAG TGCAGGCGGC CTACGCCACC
CTGAATTCGC TGGCGACCCC GGACAATGAC TCGCGAACTC AGGCCATCCA CCAGGCGCTG
ACGGCCGCTG CGGCGCAGGG CAGTACCATC CCGCAGGTGC AGCAGGCGAT TGCCGCACAG
CTGATTGCTG CCTTTGACAG CCTGAGTGCT CAGGCCGGGC AACTGACCGA TTTTTATAAC
CAGAACGAAG ACCGCCTGCT GGCACTGGGC AGCGGCAATA TCGTTCGGGT TGATGTCAAC
AAACTGTTTA GCGAGGCGAT TGCCAATCCG GCGCAGTTTG GCTTTACCAA TACCGCCGGT
ATGGCCTGCC CGCCGGGCGT TTCTTCAGCT GTGTGCAGCT CCGCCATGCC GGGTTTTGAC
AGCAGCCAAT CCTATCTGTT TGCCGATCAT TTCCACCCCA GCCCGCAGGC ACATCAACTG
ATCGCCGATT ACATTCAGGC GGTGCTGGAC GGCCCGGCGC AGGTGGTGGC GCTGAATCAG
GCGACGGCGG CCATGGCGCG TGACAGCCGC GCTACCCTCG ACAGCCGTTT CCAACAGTTG
CGCAATGGCG GCAATCCGCA AGGGGCGCTG GGCGTGTTCG GCGGTTATGC CGGACAACAC
TATGACTATT CAGCCAATCT GGCGGCAGGT GACGGCAACG CCACCACCCA TAATCTGACG
GTCGGGGTGG ATTACCAGTT GACCGACGGC TGGTTAATTG GGGCGCTGAT TTCCGGTTCC
AATGACGATC AGCAGCCTTC CAGCCGCTAC GACTATAAGG CGCGTGGCCT GCTGTTCTCG
GCCTTTACCG CCCTGGACGT GTTTGAGCAC GGTTGGGTGA ACGCCGATCT GCATTACGCG
ACAATGGATT ACGATGATAT TCGCCGCAGC ATGCAGCTAG GGTCGTTAAC CCGCACCGAA
ACCGGCAGCA CCGACGGTAA ACAGTGGGGC GCAAGGGTCA CCGCCGGTTA TGACTTCCCC
GTGACCTCCT ACCTGACCAC CGGGCCGATG GCGCAGTTCG CCTGGGATTA CAGTAACGTC
TCCGGTTACA GCGAGGACGG CAACGACAGC ACCGCCATGA GGTTTAACGA CCAGACCTAC
CATTCGCAGA TTGGTGCGCT GGGCTGGCGG TTAGACAGCA ATTTCGGCCT GTTTAACCTG
TACGCCGAGG TGAGTTATCA GCATCAGTTT GGCGATGATG TCTATCGGGC CGGCGGCGGC
CTGAAGTCCA CCCAGACCTC TTTTACCCGC GACAGCGCCA ATCAGGATAA AAACTGGCTG
GATGTGACGC TGGGGGCGAA CATGCCGCTG ACCGATCAGG TGGCCGCGTT CGCCACCGTT
TCGCAGACCG GCGGCCTGAG CAGCGGCGAA CAGTTTATGT ATAACGTCGG CGTCAGTGCG
CGGTTTTGA
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| Protein sequence | MPLKITRMPR PAVLAVAILC SMTTSALAYD QLYVFGDSLS DTGNNGRFTY DSNKHLLYDE
VLAQRIGAAL VASDNGGDNY AAGGGVAVPA LNPADNTQDQ VQSYLNRVNG RADGDGLYIH
WIGGNDLAAA ALNPTTAPGV AYNSAAAAAA QVHSLLNAGA GTVIVPTVPN IGSTPQLMEL
IIQQALTPVQ NAAVQAAYAT LNSLATPDND SRTQAIHQAL TAAAAQGSTI PQVQQAIAAQ
LIAAFDSLSA QAGQLTDFYN QNEDRLLALG SGNIVRVDVN KLFSEAIANP AQFGFTNTAG
MACPPGVSSA VCSSAMPGFD SSQSYLFADH FHPSPQAHQL IADYIQAVLD GPAQVVALNQ
ATAAMARDSR ATLDSRFQQL RNGGNPQGAL GVFGGYAGQH YDYSANLAAG DGNATTHNLT
VGVDYQLTDG WLIGALISGS NDDQQPSSRY DYKARGLLFS AFTALDVFEH GWVNADLHYA
TMDYDDIRRS MQLGSLTRTE TGSTDGKQWG ARVTAGYDFP VTSYLTTGPM AQFAWDYSNV
SGYSEDGNDS TAMRFNDQTY HSQIGALGWR LDSNFGLFNL YAEVSYQHQF GDDVYRAGGG
LKSTQTSFTR DSANQDKNWL DVTLGANMPL TDQVAAFATV SQTGGLSSGE QFMYNVGVSA
RF
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