Gene Spro_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0058 
Symbol 
ID5604825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp57838 
End bp59106 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content57% 
IMG OID640935543 
Productmajor facilitator transporter 
Protein accessionYP_001476296 
Protein GI157368307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.788855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CGACTATCGC GGCTAAACGC TGGTGGTACA TCATGCCCAT CGTGTTTATC 
ACCTACAGCC TGGCCTATCT CGACCGCGCC AACTTCAGCT TTGCTTCGGC CGCCGGCATT
AATGACGATC TGGGCATCAC CAAGGGCATG TCCTCACTGC TGGGCGCGCT GTTTTTCCTC
GGCTATTTCT TTTTCCAGAT CCCCGGCGCT ATCTATGCCG AACGCCGCAG CGTTAAAAAA
CTGATTTTCT GGTGCCTGAT CCTGTGGGGG GCCTGCGCCT CACTGACCGG CATGGTCAGT
AATATCCCCA TGCTGGCCGC TATCCGCTTT ATCCTCGGCG TGGTGGAAGC CGCGGTCATG
CCGGCGATGC TGATTTACAT CAGCAACTGG TTCACCAAAT CAGAACGCTC ACGCGCCAAT
ACCTTCCTGA TCCTCGGCAA CCCGGTCACG GTGCTGTGGA TGTCGGTGGT TTCCGGCTAC
CTGATCCACG CCTACGGCTG GCGTGAAATG TTCATCTTTG AAGGCATTCC GGCGGTGATC
TGGGCCTTCT GCTGGTGGGT GCTGGCCAAA GATAAACCCG CCCAGGCCAA ATGGCTGAGC
GACGGCGAAA AACTGGCGTT GCAGCAGCAG CTGGAAGAAG AACAGAAAGG CATTAAAGCG
GTGCGTAACT ACGGTGAAGC CTTCCGTTCA CGCAACGTTA TTCTGCTGTG CGCACAGTAC
TTTGCCTGGA GTATCGGCGT GTATGGCTTC GTGCTGTGGT TGCCTTCCAT CCTGCGCAGC
GGCATGCAGA TGGGTATGGT GGAAGCTGGC TGGCTGTCGG CGGTGCCTTA CCTGGCGGCG
ACTATCGCCA TGATCCTGGT GTCCTGGGCC TCCGACAAAA TGCAAAACCG TAAGCTGTTC
GTCTGGCCAC TGTTGCTGAT TGGCGCGCTG GCTTTCTTCG GCTCTTACGC CGTCGGCGCC
AACCATTTCT GGGTCTCTTA CACCCTGTTG GTGATTGCCG GTGCCGCTAT GTATGCCCCT
TATGGGCCTT TCTTCGCCAT CATTCCTGAA ATGCTGCCGA AAAACGTTGC CGGTGGCGCT
ATGGCACTGA TCAACAGCAT GGGTGCACTG GGTTCCTTCT TCGGCTCGTG GTTTGTCGGT
TACCTGAACG GCGCAACCGG TAGCCCGGCG GCTTCTTATA TGTTTATGGC TATTGCCCTG
CTGGCGGCGG TGGTGCTGAC GCTGGTCGTC AAACCCGCTC GCAACGAGGC CCAGCCACAA
CTGGCCTGA
 
Protein sequence
MNKATIAAKR WWYIMPIVFI TYSLAYLDRA NFSFASAAGI NDDLGITKGM SSLLGALFFL 
GYFFFQIPGA IYAERRSVKK LIFWCLILWG ACASLTGMVS NIPMLAAIRF ILGVVEAAVM
PAMLIYISNW FTKSERSRAN TFLILGNPVT VLWMSVVSGY LIHAYGWREM FIFEGIPAVI
WAFCWWVLAK DKPAQAKWLS DGEKLALQQQ LEEEQKGIKA VRNYGEAFRS RNVILLCAQY
FAWSIGVYGF VLWLPSILRS GMQMGMVEAG WLSAVPYLAA TIAMILVSWA SDKMQNRKLF
VWPLLLIGAL AFFGSYAVGA NHFWVSYTLL VIAGAAMYAP YGPFFAIIPE MLPKNVAGGA
MALINSMGAL GSFFGSWFVG YLNGATGSPA ASYMFMAIAL LAAVVLTLVV KPARNEAQPQ
LA