Gene Spro_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0057 
Symbol 
ID5604824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp56756 
End bp57733 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content58% 
IMG OID640935542 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001476295 
Protein GI157368306 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT CTATCGTTTT ATACAAAAAT ATCCCCGCCG ACCTGCGTGA ACGACTGGAA 
CAGCACTTCA CCGTGCACGC CTTCGACGGC CTGACCCCGG ATAACCACGA TGAGCTGCGC
CAGGCGTTGC AACAGGCGGA AGGGATCATC GGTTCCGGCG GTAAAATTGA TGAGGCTTTC
CTGCAGCAGA CGCCAAAACT GCGTGCGGCC TCAACCATTT CCGTCGGTTA CGACAATTTC
GACGTCGACG CGCTTAATGC TCATAACGTG CTGCTGATGC ATACCCCTAC CGTGCTGACC
GAAACCGTCG CCGATACCAT CATGAGTCTG GTGCTGGCGA CAGCGCGCCG GGTGGTGGAA
GTGGCCGAAC GGGTAAAGGC CGGCGAATGG CAGGGCAGCA TTGGAGCCGA CTGGTTTGGC
GTCGATGTAC ATCATAAAAC CATCGGCATC CTCGGGATGG GCCGAATTGG CCTGGCGCTG
GCGCAACGTG CGCACTTCGG CTTCGGCATG CCGGTGTTGT ATAACGCCCG CCGCACGCAC
GAAGAAGCCG AGCAACGTTT TAACGCCCGC CGCTGTGACC TGGATACGCT ATTGGCTGAA
TCCGATTTCA TCTGCATTAC GCTGCCGCTG ACGGATGAAA CCTTCCATAT GATCAGCCGT
GACCAACTGG CGAAAATGAA AAAGAGCGGC ATCCTGATCA ACGCCGGTCG TGGCCCGGTG
GTGGACGAAG CTGCGCTGAT AGAAGCGCTG CAGAACGGGA CCATCCATGC CGCCGGGCTG
GACGTGTTCG AAAAAGAGCC GCTGCCGGTG TCTTCTCCGC TGCTGACGCT GCCAAACGTA
GTGGCACTGC CGCATATCGG TTCTGCGACC CATGAGACCC GCTATGGCAT GGCCGAATGT
GCCGTCGACA ACCTGATTGC CGCCCTGACC GGCACGGTCA AAGAAAACTG CGTTAATCCG
CAACTGCTGA AAAAGTAA
 
Protein sequence
MKPSIVLYKN IPADLRERLE QHFTVHAFDG LTPDNHDELR QALQQAEGII GSGGKIDEAF 
LQQTPKLRAA STISVGYDNF DVDALNAHNV LLMHTPTVLT ETVADTIMSL VLATARRVVE
VAERVKAGEW QGSIGADWFG VDVHHKTIGI LGMGRIGLAL AQRAHFGFGM PVLYNARRTH
EEAEQRFNAR RCDLDTLLAE SDFICITLPL TDETFHMISR DQLAKMKKSG ILINAGRGPV
VDEAALIEAL QNGTIHAAGL DVFEKEPLPV SSPLLTLPNV VALPHIGSAT HETRYGMAEC
AVDNLIAALT GTVKENCVNP QLLKK