Gene Spro_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0046 
Symbol 
ID5607320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp47082 
End bp48362 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content60% 
IMG OID640935531 
Producthypothetical protein 
Protein accessionYP_001476284 
Protein GI157368295 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.379833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC GGGAAAAACA GCTGACTTTT GATCCACGTG GGCATCAGCT AACCAATATT 
AACGTCTGGA CGCCGGACAG CCAGTGGCTG GCTTACGACG TACGCCCGAG CGGCGCCTCT
TTCACCGGCC TGAGTATTGA ACGGGTGAAC GTCGACAGCG GCGTGGTGGA AGTGGTGTAC
CGTGCCCAGC ACGGTGCTCA TGTGGGTGTG GTGACCGTCA GCCCGGACGC ACCGGCCCGA
TATGCTTTTA TCCACGGCCC GGAGCACCCA GATAGCGTTT GGCATTACGA TTTTCACCAT
CGTCGTGGGG TGATTGTCAG CGAACCGGAT CGCGAACTGG CCATTACCCT CGATGCGATG
GACATCACCG CGCCCTATAC TCCCGGCGCA CTGCGCGGCG GCACTCACGT GCACGTTTTT
AGTCCGGACG GCAGTCGCCT GAGCTTTACC TATAATGACC ATGTGATGCA TGAGCTGGAC
CCGGCGCTGG ATCTGCGCAA CGTGGGCGTA GCCGTGCCAT TACAGGGCGT GAACCCTCCC
AAGCAGCATC CGCGTGAGTA TGACGGCAGC CATTACTGCG TATTGGTCAG CGAGACCACG
CCACAACCGC AGCCGGGCAG TGACCAAATT AATCGCGCCT ATGAAGAGGG CTGGGTTGGC
CAAGGCGGTT ATACCCGGCC TGATGGGCGG CAACAGCGCT GGGCGCTGGC GTTTATCGGC
GATACGATTT CCAGCAGCGG TGAAAAGCTG CCTGAGGTGT TTATCGTTGA TCTGCCGCAG
GATGATGCCG ATTACGCCAA AGCCGGTGCC CGGCCGTTGC AGGGTACCCC GACCCAAATA
CCTGCCCCCC CGCTGGGGGT ACGCCAACGT CGGCTGACCT TTACTGGCCA GCGACGTTTC
CCTGGTGTGG CGACCACTCC CCGCCACTGG CTGCGCAGTT CACCCGACGG CAGTATGATT
GCCTGCCTGA TGAAGGATGA CGCGGGCGTG GTACAGCTGT GGGTGGTCTC ACCCAACGGC
GGTGACCCGC GTCAGGTCAC GCAGGGTGAA CAGGGGATTC AATCGGCGTT CAGTTGGCAT
CCGCAGGGCG GTCGTATCGC GCTGGTGTGT GATAACAGCC TGATGTTATG TGAGGTAGCC
AGCGGACGGA TGCAGCGTTT GACGCAGCGT ACTGCGCTAC CGCCATCGGG TGATGCGGTG
GTGTTCTCTC CGGACGGCAG TAAAGTGGCG TTTATGCGTG AGATCGACGG GTTCAGCCAG
ATTTTTGTGG CCGAGGTATG A
 
Protein sequence
MSHREKQLTF DPRGHQLTNI NVWTPDSQWL AYDVRPSGAS FTGLSIERVN VDSGVVEVVY 
RAQHGAHVGV VTVSPDAPAR YAFIHGPEHP DSVWHYDFHH RRGVIVSEPD RELAITLDAM
DITAPYTPGA LRGGTHVHVF SPDGSRLSFT YNDHVMHELD PALDLRNVGV AVPLQGVNPP
KQHPREYDGS HYCVLVSETT PQPQPGSDQI NRAYEEGWVG QGGYTRPDGR QQRWALAFIG
DTISSSGEKL PEVFIVDLPQ DDADYAKAGA RPLQGTPTQI PAPPLGVRQR RLTFTGQRRF
PGVATTPRHW LRSSPDGSMI ACLMKDDAGV VQLWVVSPNG GDPRQVTQGE QGIQSAFSWH
PQGGRIALVC DNSLMLCEVA SGRMQRLTQR TALPPSGDAV VFSPDGSKVA FMREIDGFSQ
IFVAEV