Gene Spro_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0043 
Symbol 
ID5607211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp43762 
End bp44379 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID640935528 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_001476281 
Protein GI157368292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.31961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGA ATACTGAACT GCCGCTGATT GCCATCCTGC GCGGCATTAC GCCGCAGGAG 
GTGGCTGATC ACGTACAAAC CTTGCTTGAG GCGGGGTTCG ATGCAATTGA AATACCGATG
AACTCGCCGG ACTGGCAGCA AAGCATCGGT GATACGGTGA AGAAATTCGG CGATCGCGCC
CTGATTGGTG CCGGCACCGT GCTGCAACCT GCGCAGGTGG AAGAGTTGGC CGCGCTGGGT
GGTCAACTGG TGGTGACTCC CAATACCCAA CCGGCGGTGA TCCGCAGGGC CGTGGCGCTG
GGTATGACGG TTTGCGCCGG TTGCGCCACC GCGTCAGAAG CATTCAACGC ACTGGAGGCC
GGGGCTCAGG CATTGAAGAT TTTCCCCTCG GTCTCCTTTG GCCCGGACTA TATCAAGGCG
CTGAAAGCGG TTCTGCCGCC TCAGATCCCT GTTTTTGCCG TCGGCGGCAT CACGCCGGAA
AACTTGCATC TGTATCTGGC CGCAGGCTGC GTGGGTGCCG GGTTGGGGGG CGATCTCTAT
CGCGCCGGCC AATCGGTGGA ACGCACCGCT CAGCAGGCTG CCGCTTTCGT TCGGGCCTAT
AAGGAAGCCA CTCAATGA
 
Protein sequence
MSWNTELPLI AILRGITPQE VADHVQTLLE AGFDAIEIPM NSPDWQQSIG DTVKKFGDRA 
LIGAGTVLQP AQVEELAALG GQLVVTPNTQ PAVIRRAVAL GMTVCAGCAT ASEAFNALEA
GAQALKIFPS VSFGPDYIKA LKAVLPPQIP VFAVGGITPE NLHLYLAAGC VGAGLGGDLY
RAGQSVERTA QQAAAFVRAY KEATQ