| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0042 |
|---|
| Symbol | |
|---|
| ID | 5607210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 42885 |
|---|
| End bp | 43778 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640935527 |
|---|
| Product | 2-dehydro-3-deoxygalactonokinase |
|---|
| Protein accession | YP_001476280 |
|---|
| Protein GI | 157368291 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.351596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA GCTTTATCGC GATTGACTGG GGTTCCACCA ACCTGCGCGC CTGGCGTTAC
GAACAGGGCG TCTGTGTCGA TAGCCTGCAG TCGCAGGCCG GTGTTACCCG CCTTGATGGC
CGCACGCCAC AGCAGGTTTT CAGCGAGCTG ATGGCGCGGT GGGCTGAGCC GCTGCCGGTG
GTGATGGCCG GGATGGTCGG CAGCAATGCC GGCTGGCTGC AGGTGCCTTA TCTGCATTGC
CCAACCCGCC TGACAGAAGT TGCCCAACAG TTAACGGCGA TAGAGCAGGC TTTACCTTAC
CGGGCCTGGA TTATTCCGGG CATCTGTATC GAACGTGAAG ATAACTACAA CGTCATGCGT
GGTGAAGAAA CCCAGTTGAT TGGCGCCTAT GCCGAACAGC CGGCGGCGGT TTATATCATG
CCCGGTACCC ACAGCAAATG GGTGCGCATG GAGGGCGACA CCCTGGCGGA TTTCCGCACG
GTGATGACGG GCGAATTGCA TCATTTGCTG CTCAGCCATT CGTTGATCGG CGTGGGGCTA
AGTGAACAAC GGCCTAATCC ACAGGCGTTT ATCAACGGAT TGGAAGTCGG CATGAATGAA
AGCCACATCG TGCGACGTTT ATTTGAAACC CGCGCCGCTC ACGTGCTTGG CAAACTGGAA
AAAAGCGCCG TCAGCGACTG GCTTTCCGGC TTGTTGATCG GCAACGAGGT GGCGGAGATG
CAGCGTGAAT ACCCGCTGCC GCCGGATGCC GCATTAACGG TGATCGGCAA CCCGCAGCTT
GGCGAGCGTT ATGCCCAGGC ACTGACTATG GCCGGGATAC GCCACCAGAT CCTGGATGGC
GATCGGGCTT TCCAATCGGG AATAAGGAGC ATTGTGCATG AGCTGGAATA CTGA
|
|---|
| Protein sequence | MSDSFIAIDW GSTNLRAWRY EQGVCVDSLQ SQAGVTRLDG RTPQQVFSEL MARWAEPLPV
VMAGMVGSNA GWLQVPYLHC PTRLTEVAQQ LTAIEQALPY RAWIIPGICI EREDNYNVMR
GEETQLIGAY AEQPAAVYIM PGTHSKWVRM EGDTLADFRT VMTGELHHLL LSHSLIGVGL
SEQRPNPQAF INGLEVGMNE SHIVRRLFET RAAHVLGKLE KSAVSDWLSG LLIGNEVAEM
QREYPLPPDA ALTVIGNPQL GERYAQALTM AGIRHQILDG DRAFQSGIRS IVHELEY
|
|---|
| |