Gene Spro_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0040 
Symbol 
ID5607327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp40999 
End bp41946 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content60% 
IMG OID640935525 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001476278 
Protein GI157368289 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.136717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CCATTTTGCA GGCCTCACCT TTGCCGCAAA GGTTGGTGGT GCAACTGCGT 
CAACATTTCC CATTGGTGGA TCAGCGCGAA TTGGCCCCTT TGGCGCTGGC GGCCCGAGCC
AGCGAATTCA CCGTCCTGCT GGTTGATGGC GAAACGGCGG TCAGTGCGGC ACAAATTGCC
GCTTTGCCGC AGTTAAAACT GATTGCCGTA TTTGGTGTGG GCTACGAGCG GGTGGATGTG
TTGGCCGCAC GGGCTCAGGG TGTGCGCGTC ACGCATACGC CGGGGGTGCT GACCGATGAC
GTTGCCGATC TGGCGATCGG GCTGCTGCTG GCGACGGCCA GGCAGATTGG CGGCGCCCAA
CGTTTTATCG AGCGCGGTGA CTGGCTGCAG GGCGGCTATC CCTGGACGCG CAAGGTTAGC
GGCGCACGCC TGGGCATTCT TGGATTGGGA AGGATCGGAC GGGCGATAGC TCAGCGGGCA
ACCGCCTTCA ATATGGCCGT CAGTTATCAT TCCCGCCAAC AATATGACGA TTTTAGCGGG
CGTTTTTTTG CGACCCCTCA GGCACTGGCC GAGCACTGCG ACTTTCTGTT GGTTTGCACC
AACGGAGGGG TGGCGACGCG GGCGCTGGTG GATGCAAAGG TGTTAGCGGC ATTGGGCGCT
AACGGCATCT TAATCAACAT TGCGCGAGGT TCGGTGGTCG ACGAAACGGC ATTAGTAAAG
GCGATTGACC AGGGAGTAAT TGCCGGTGCT GGTCTGGATG TTTTTGAATG CGAACCGCAG
GTTCCCGCCG GGTTGATGGG GCGGGACAAT GTGGTACTAA CGCCGCATAT GGCCAGCGCG
ACCCACAGCA CGCGGCGGAT GATGGCCGAT CTGGTGTTCG ACAACATAGC CGCTTATTTT
GCCGGTCGGG CTTTGCCAAC GCCGGTAGCG GAAAGCCCCA ACCCGTAG
 
Protein sequence
MAETILQASP LPQRLVVQLR QHFPLVDQRE LAPLALAARA SEFTVLLVDG ETAVSAAQIA 
ALPQLKLIAV FGVGYERVDV LAARAQGVRV THTPGVLTDD VADLAIGLLL ATARQIGGAQ
RFIERGDWLQ GGYPWTRKVS GARLGILGLG RIGRAIAQRA TAFNMAVSYH SRQQYDDFSG
RFFATPQALA EHCDFLLVCT NGGVATRALV DAKVLAALGA NGILINIARG SVVDETALVK
AIDQGVIAGA GLDVFECEPQ VPAGLMGRDN VVLTPHMASA THSTRRMMAD LVFDNIAAYF
AGRALPTPVA ESPNP