Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0028 |
Symbol | |
ID | 5606327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 27544 |
End bp | 29181 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640935513 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_001476266 |
Protein GI | 157368277 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.15409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0935166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCGC AACGCAATCT TCTCCTCATC GCTCTGCTGT TCGTGTCTTT CATGATCTGG CAAGCCTGGC AAACGGACAA TGCTCCGCAA CCAGTCGCGC AGACCACGCA ACAGACTTCG AACCCAGCTA CCGGTGATGC CGCAAGCTCA GCAGTTCCAG CCAGTGGCCA AGGTAAACTG ATTACCGTAA ACACTGACGT GCTGTCGCTG ACCATCAACA CCCGTGGTGG TGATATCGAG CAGGCTAAAC TGTTGGCCTA CCCTGACACT CTGGGTTCAT CGACGCCATT CCAGCTGCTG GAAACCACAC CGGCATTTGT CTATCAGGCG CAAAGCGGCC TGACCGGCAG AAACGGCCCG GATAACCCGG CAAATGGCGA ACGTCCTCTG TTCCAGGCGG CGCAGGACAG CTATACCCTG CCGGAAGGCC AGGAAGAGTT GCGCATCCCG CTGACCTTTA CCGGTAAAGA TGGCGCTATC TACACCAAAA CTTTCGTGCT CAAACGCAAT CATTACGCGG TTGCCGTTGA CTACAACGTC GACAACAAGA GCACCACTCC GCTGGAACTG ACCCTGTTCG GCCAACTGAA GCAGACCACC GAGCTGCCTA AGCACCGTGA CACCGGCAGC AACAACTTTG CCCTGCACAC CTTCCGTGGC GCGGCTTACT CTTCCAGCGA TGACAAATAT CAGAAGTATG CGTTCGATAA GGACGAGAAC CTGAGTGTCA CCACCCAGGG CGGTTGGGTT GCAATGCTGC AACAATACTT CGCCACCGCG TGGGTACCGG CAACTCAGGG TAGCAATACC TTCTATACCG CCAAGCCTGG CGACAACCTG TCTACCATCG GCTTCAAATC TACTCCGGTA GTGGTGCAGC CTGGTGCGCA GCAGCAACTG AACGCCACCC TGTGGGTAGG CCCGGAACTG CAGGATCAGA TGGCACAACT GGCGCCGCAT CTGGACCTGA CCGTGGATTA CGGTTGGTTG TGGTTCATCT CCCAACCGCT GTTCAAACTG CTGAAGTTCA TCCACGGCTT TATCGGTAAC TGGGGCTTCT CAATTATCAT CATCACCTTC ATCGTGCGCG GCATCATGTA CCCGCTGACC AAAGCGCAGT ACACCTCGAT GGCGAAAATG CGCATGCTGC AGCCAAAACT GCAGGCGATG CGTGAGCGTA TCGGTGATGA CAAACAGCGC ATGAGTCAGG AAATGATGGC GCTGTACAAG TCTGAGAAAG TGAATCCGTT GGGGGGTTGT CTGCCGCTGG TTATCCAGAT GCCAATCTTC CTGGCGCTGT ACTACATGTT GATGGGCTCG GTTGAGCTGC GCCACGCGCC GTTCGCTTTG TGGATCCACG ACCTGTCGGC GCAAGACCCG TACTACATCT TGCCAATCCT GATGGGCGTG ACGATGTTCT TCATTCAGAA GATGTCGCCG ACCACCGTGA CTGATCCGAT GCAGCAGAAA ATCATGACCT TCATGCCGGT GATCTTCACA GTGTTCTTCC TGTGGTTCCC GTCCGGTCTG GTGCTGTACT ACATCGTCAG TAACCTGGTG ACCATCCTCC AGCAGCAGTT GATTTACCGC GGCCTGGAAA AACGTGGTTT ACACAGCCGC GACAAGAAAA AAACCTAA
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Protein sequence | MDSQRNLLLI ALLFVSFMIW QAWQTDNAPQ PVAQTTQQTS NPATGDAASS AVPASGQGKL ITVNTDVLSL TINTRGGDIE QAKLLAYPDT LGSSTPFQLL ETTPAFVYQA QSGLTGRNGP DNPANGERPL FQAAQDSYTL PEGQEELRIP LTFTGKDGAI YTKTFVLKRN HYAVAVDYNV DNKSTTPLEL TLFGQLKQTT ELPKHRDTGS NNFALHTFRG AAYSSSDDKY QKYAFDKDEN LSVTTQGGWV AMLQQYFATA WVPATQGSNT FYTAKPGDNL STIGFKSTPV VVQPGAQQQL NATLWVGPEL QDQMAQLAPH LDLTVDYGWL WFISQPLFKL LKFIHGFIGN WGFSIIIITF IVRGIMYPLT KAQYTSMAKM RMLQPKLQAM RERIGDDKQR MSQEMMALYK SEKVNPLGGC LPLVIQMPIF LALYYMLMGS VELRHAPFAL WIHDLSAQDP YYILPILMGV TMFFIQKMSP TTVTDPMQQK IMTFMPVIFT VFFLWFPSGL VLYYIVSNLV TILQQQLIYR GLEKRGLHSR DKKKT
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