Gene Spro_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0027 
SymboltrmE 
ID5606326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp26077 
End bp27441 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content61% 
IMG OID640935512 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_001476265 
Protein GI157368276 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.151422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCGATACCAT CGTAGCCCAA GCCACCCCGC CGGGACGCGG CGGCGTCGGC 
ATTCTGCGTA TTTCCGGCCG TGGCGCCAAA GATGTCGCCC AGGCCCTGCT CGGCAAGCTA
CCCAAGCCGC GTTACGCCGA TTACCTGCCA TTCCGGGATG CCGCAGGTGC CACCCTGGAT
CAGGGCATCG CACTGTGGTT CCCAGGCCCT AATTCGTTTA CCGGCGAAGA CGTGCTGGAG
CTGCAAGGCC ACGGCGGGCC GGTGATCCTC GATCTGCTGC TCAAACGCGT GTTGGCGCTG
CCAGGCATGC GTATCGCGCG GCCCGGCGAG TTTTCCGAAC GCGCATTCCT CAACGACAAG
CTGGATCTGG CGCAGGCCGA GGCGATTGCC GACCTGATCG ATGCCAGTTC CGAGCAGGCG
GCACGTTCAG CCATGAACTC GCTGCAGGGG GCTTTTTCCA CCCGCATCCA TCAGCTTGTG
GAAGCACTTA CTCACCTGCG GATCTATGTG GAAGCGGCCA TCGACTTCCC CGATGAGGAA
ATCGACTTCC TGTCTGACGG TAAAATCGAA GCGCAGCTCA ACGGCGTTAT GGCCGATCTG
GACAGCGTAC GCGCCGAAGC GCGCCAGGGC AGCCTGCTGC GTGAAGGGAT GAAGGTGGTG
ATCGCCGGGC GGCCAAACGC CGGTAAATCC AGCCTGCTGA ACGCATTGGC CGGCCGCGAG
GCGGCGATTG TTACCGATAT TGCCGGCACC ACCCGCGACG TTTTGCGCGA ACATATTCAC
ATCGACGGCA TGCCATTGCA CATCATCGAC ACCGCCGGCC TGCGTGAAGC CAGCGACGAA
GTTGAGCGCA TCGGTATCGA ACGTGCATGG AACGAGATCG AACAGGCGGA TCGCGTGCTG
TTTATGGTCG ATGGCACCAC CACCGCGGCC ACCGAACCGG CTGAGATTTG GCCAGAGTTT
ATGGCACGTC TGCCGCACCG CTTGCCAATC ACCGTGGTGC GTAATAAAGC CGACATCACC
GGTGAAACGC TGGGTATGAC CGAAGTAAAT GGCCACTCAC TTATTCGCCT GTCGGCGCGT
ACCGGTGAAG GCATCGATCT GCTGCGCGAC CACCTGAAGC AGAGCATGGG CTTCACCAGC
AATATGGAAG GTGGCTTCCT GGCGCGCCGT CGCCATCTGC AGGCGCTTGA GCAAGCGGCC
CAGCATCTGG TCGAGGGCAA AGAACAGTTA GTAAGCGCTT ACGCGGGGGA GCTGCTGGCC
GAGGAATTGC GCCTGGCGCA GCAAGCACTG AGTGAAATCA CCGGCGAATT TACCTCCGAT
GATCTGCTGG GGCGCATCTT CTCCAGCTTC TGTATCGGCA AGTAA
 
Protein sequence
MSTTDTIVAQ ATPPGRGGVG ILRISGRGAK DVAQALLGKL PKPRYADYLP FRDAAGATLD 
QGIALWFPGP NSFTGEDVLE LQGHGGPVIL DLLLKRVLAL PGMRIARPGE FSERAFLNDK
LDLAQAEAIA DLIDASSEQA ARSAMNSLQG AFSTRIHQLV EALTHLRIYV EAAIDFPDEE
IDFLSDGKIE AQLNGVMADL DSVRAEARQG SLLREGMKVV IAGRPNAGKS SLLNALAGRE
AAIVTDIAGT TRDVLREHIH IDGMPLHIID TAGLREASDE VERIGIERAW NEIEQADRVL
FMVDGTTTAA TEPAEIWPEF MARLPHRLPI TVVRNKADIT GETLGMTEVN GHSLIRLSAR
TGEGIDLLRD HLKQSMGFTS NMEGGFLARR RHLQALEQAA QHLVEGKEQL VSAYAGELLA
EELRLAQQAL SEITGEFTSD DLLGRIFSSF CIGK