Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0027 |
Symbol | trmE |
ID | 5606326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 26077 |
End bp | 27441 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640935512 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001476265 |
Protein GI | 157368276 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.151422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CCGATACCAT CGTAGCCCAA GCCACCCCGC CGGGACGCGG CGGCGTCGGC ATTCTGCGTA TTTCCGGCCG TGGCGCCAAA GATGTCGCCC AGGCCCTGCT CGGCAAGCTA CCCAAGCCGC GTTACGCCGA TTACCTGCCA TTCCGGGATG CCGCAGGTGC CACCCTGGAT CAGGGCATCG CACTGTGGTT CCCAGGCCCT AATTCGTTTA CCGGCGAAGA CGTGCTGGAG CTGCAAGGCC ACGGCGGGCC GGTGATCCTC GATCTGCTGC TCAAACGCGT GTTGGCGCTG CCAGGCATGC GTATCGCGCG GCCCGGCGAG TTTTCCGAAC GCGCATTCCT CAACGACAAG CTGGATCTGG CGCAGGCCGA GGCGATTGCC GACCTGATCG ATGCCAGTTC CGAGCAGGCG GCACGTTCAG CCATGAACTC GCTGCAGGGG GCTTTTTCCA CCCGCATCCA TCAGCTTGTG GAAGCACTTA CTCACCTGCG GATCTATGTG GAAGCGGCCA TCGACTTCCC CGATGAGGAA ATCGACTTCC TGTCTGACGG TAAAATCGAA GCGCAGCTCA ACGGCGTTAT GGCCGATCTG GACAGCGTAC GCGCCGAAGC GCGCCAGGGC AGCCTGCTGC GTGAAGGGAT GAAGGTGGTG ATCGCCGGGC GGCCAAACGC CGGTAAATCC AGCCTGCTGA ACGCATTGGC CGGCCGCGAG GCGGCGATTG TTACCGATAT TGCCGGCACC ACCCGCGACG TTTTGCGCGA ACATATTCAC ATCGACGGCA TGCCATTGCA CATCATCGAC ACCGCCGGCC TGCGTGAAGC CAGCGACGAA GTTGAGCGCA TCGGTATCGA ACGTGCATGG AACGAGATCG AACAGGCGGA TCGCGTGCTG TTTATGGTCG ATGGCACCAC CACCGCGGCC ACCGAACCGG CTGAGATTTG GCCAGAGTTT ATGGCACGTC TGCCGCACCG CTTGCCAATC ACCGTGGTGC GTAATAAAGC CGACATCACC GGTGAAACGC TGGGTATGAC CGAAGTAAAT GGCCACTCAC TTATTCGCCT GTCGGCGCGT ACCGGTGAAG GCATCGATCT GCTGCGCGAC CACCTGAAGC AGAGCATGGG CTTCACCAGC AATATGGAAG GTGGCTTCCT GGCGCGCCGT CGCCATCTGC AGGCGCTTGA GCAAGCGGCC CAGCATCTGG TCGAGGGCAA AGAACAGTTA GTAAGCGCTT ACGCGGGGGA GCTGCTGGCC GAGGAATTGC GCCTGGCGCA GCAAGCACTG AGTGAAATCA CCGGCGAATT TACCTCCGAT GATCTGCTGG GGCGCATCTT CTCCAGCTTC TGTATCGGCA AGTAA
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Protein sequence | MSTTDTIVAQ ATPPGRGGVG ILRISGRGAK DVAQALLGKL PKPRYADYLP FRDAAGATLD QGIALWFPGP NSFTGEDVLE LQGHGGPVIL DLLLKRVLAL PGMRIARPGE FSERAFLNDK LDLAQAEAIA DLIDASSEQA ARSAMNSLQG AFSTRIHQLV EALTHLRIYV EAAIDFPDEE IDFLSDGKIE AQLNGVMADL DSVRAEARQG SLLREGMKVV IAGRPNAGKS SLLNALAGRE AAIVTDIAGT TRDVLREHIH IDGMPLHIID TAGLREASDE VERIGIERAW NEIEQADRVL FMVDGTTTAA TEPAEIWPEF MARLPHRLPI TVVRNKADIT GETLGMTEVN GHSLIRLSAR TGEGIDLLRD HLKQSMGFTS NMEGGFLARR RHLQALEQAA QHLVEGKEQL VSAYAGELLA EELRLAQQAL SEITGEFTSD DLLGRIFSSF CIGK
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