Gene Spro_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0020 
Symbol 
ID5606862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp18610 
End bp19275 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content56% 
IMG OID640935505 
Product6-phosphogluconate phosphatase 
Protein accessionYP_001476258 
Protein GI157368269 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.334296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAA TTGACTGTAT TTTGTTTGAT TGCGACGGCA CGCTGGTGGA CAGCGAAGTG 
CTGTGCAGCA AAGCCTATGT GCACATGTTT GCCCACTATG GCATTCACCT TTCGCTGGAC
GAGGTATTCA GAAAGTACAA AGGGGTAAAG CTGTACGAAA TTATCGAACA GGTTAATGCG
GAGCACGGCG TCGCCTTGCC GAAGGAAGAA CTGGAGCCTT TATACCGTCA GGAAGTGGCC
CGTCTGTTTG ACAGCGAACT GCAGCAGATT GCCGGTGCGC GCGAGCTGCT GGCGCAGGTG
ACAGTACCAA TGTGTACCGT GTCTAACGGC CCGGTCAGCA AAATGCAGCA CTCGCTCGGC
CTGACCGACA TGCTCCACTA TTTTGATGAC CGGTTGTTCA GCGGCTATGA CATTCAGCGC
TGGAAACCGG ACCCGGCGAT CGTGTTTCAC GCCGCCGAAA AAATGCGGGT GCCGGTGGAG
CGTTGCATCC TGGTGGACGA CTCCGCTGCT GGTGCGCAGG CGGGGATCGC CGCCGGGATC
CCAGTATTTT ACTTCTGCGC CGATCCGCAC AACCAACCGA TCGACCATCC GCTGGTCACC
GCATTCGACG ATTTGGCGCA ATTACCAGCG CTGTGGCGTG AACGCGGCTG GCAGTTGACT
AGCTAG
 
Protein sequence
MNQIDCILFD CDGTLVDSEV LCSKAYVHMF AHYGIHLSLD EVFRKYKGVK LYEIIEQVNA 
EHGVALPKEE LEPLYRQEVA RLFDSELQQI AGARELLAQV TVPMCTVSNG PVSKMQHSLG
LTDMLHYFDD RLFSGYDIQR WKPDPAIVFH AAEKMRVPVE RCILVDDSAA GAQAGIAAGI
PVFYFCADPH NQPIDHPLVT AFDDLAQLPA LWRERGWQLT S