Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0018 |
Symbol | |
ID | 5604077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 17162 |
End bp | 17875 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640935503 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001476256 |
Protein GI | 157368267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.219606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTGG ACTGGCTGCT GGCGCCGGAG TATCTGAGCT GGCTGTGGCG GGGTTTCCTG CTGACGCTGT GGCTTTCTGC CTGCGCGAGC CTGGCCGCCA CGCTGTTGGG GTTTTTACTG ACCGCGATGC GTGACAGCCG CCTGCGGGCA CTGCGTTGGC TGGCGGTGGG TTACAGTTCG TTGTTTCGCA ATACGCCGTT GCTGGTACAG CTGTTCTTCT GGTATTTCGC CGCCGGGCAG ATCCTGCCGT CCGCCGCCAT GCAGTGGCTG AATACTTCAC ATCAAATCGG CCCGCTTGAG TGGCCGTCGT TTGAATTTCT CGCCGGTTTT TTCGGCCTGA CGCTGTACTC CAGCGCTTTT ATCGCCGAAG AGATCCGTTC CGGCATCCGT GGTGTCGCCG GTGGGCAAAA ATATGCGGCC AACGCGCTGG GATTAACCGG CTGGCAGGCG ATGCGCTATG TGGTGCTGCC ACAGGCGCTG AAAATCGCCA TGCCGCCGCT GCTGGGCCAG TATATGAACG TGATAAAAAA CTCCTCGCTG ACCATGGCGA TCGGCGTTGC CGAACTGTCC TATGCTTCGC GTCAGGTGGA AACCGAGACG CTGCGCACCT TCCAGGCGTT TGGCGTGGCG ACGGTGCTGT ACATCGCCAT CATTGCGCTG TTGGAAGGCT GGGGTATGTG GCGACAGCAG CGTAAACCGC TGAGAGGGCA CTAA
|
Protein sequence | MNLDWLLAPE YLSWLWRGFL LTLWLSACAS LAATLLGFLL TAMRDSRLRA LRWLAVGYSS LFRNTPLLVQ LFFWYFAAGQ ILPSAAMQWL NTSHQIGPLE WPSFEFLAGF FGLTLYSSAF IAEEIRSGIR GVAGGQKYAA NALGLTGWQA MRYVVLPQAL KIAMPPLLGQ YMNVIKNSSL TMAIGVAELS YASRQVETET LRTFQAFGVA TVLYIAIIAL LEGWGMWRQQ RKPLRGH
|
| |