| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_R0138 |
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| Symbol | |
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| ID | 5610252 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4256952 |
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| End bp | 4258488 |
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| Gene Length | 1537 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640934446 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0242297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00220141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC
GGAAACGGAG AAAAGCTTGC TTTTCAGACG TCGAGCGGCG GACGGGTGAG TAATGCCTAG
ATATCTGCCT AGTCGTGGGG GATAACAGTT GGAAACGACT GCTAATACCG CATACGCCCT
ACGGGGGAAA GGAGGGGACC TTCGGGCCTT TCGCGATTAG ATGAGTCTAG GTGGGATTAG
CTAGTAGGTG AGGTAATGGC TCACCTAGGC GACGATCCCT AGCTGTTCTG AGAGGATGAT
CAGCCACACT GGGACTGAGA CACGGCCCAG ACTCCTACGG GAGGCAGCAG TGGGGAATAT
TGCACAATGG GCGAAAGCCT GATGCAGCCA TGCCGCGTGT GTGAAGAAGG CCTTCGGGTT
GTAAAGCACT TTCAGCGAGG AGGAAAGGTA GGTAGTTAAT AACTGCTTGC TGTGACGTTA
CTCGCAGAAG AAGCACCGGC TAACTTCGTG CCAGCAGCCG CGGTAATACG AGGGGTGCAA
GCGTTAATCG GAATTACTGG GCGTAAAGCG TACGCAGGCG GTTTGTTAAG CCAGATGTGA
AAGCCCCGGG CTCAACCTGG GAATTGCATT TGGAACTGGC AAACTAGAGT CTTGTAGAGG
GGGGTAGAAT TTCAGGTGTA GCGGTGAAAT GCGTAGAGAT CTGAAGGAAT ACCGGTGGCG
AAGGCGGCCC CCTGGACAAA GACTGACGCT CATGTACGAA AGCGTGGGGA GCAAACAGGA
TTAGATACCC TGGTAGTCCA CGCCGTAAAC GATGTCTACT CGGAGTTTGG TAACTTAGTT
ACTGGGCTCC CAAGCTAACG CATTAAGTAG ACCGCCTGGG GAGTACGGCC GCAAGGTTAA
AACTCAAATG AATTGACGGG GGCCCGCACA AGCGGTGGAG CATGTGGTTT AATTCGATGC
AACGCGAAGA ACCTTACCTA CTCTTGACAT CCAGAGAATT CGCTAGAGAT AGCTTAGTGC
CTTCGGGAAC TCTGAGACAG GTGCTGCATG GCTGTCGTCA GCTCGTGTTG TGAAATGTTG
GGTTAAGTCC CGCAACGAGC GCAACCCTTA TCCTTATTTG CCAGCACGTA ATGGTGGGAA
CTTTAGGGAG ACTGCCGGTG ATAAACCGGA GGAAGGTGGG GACGACGTCA AGTCATCATG
GCCCTTACGA GTAGGGCTAC ACACGTGCTA CAATGGTCGG TACAGAGGGT CGCAAAGCCG
CGAGGTGGAG CTAATCCCAC AAAGCCGGTC GTAGTCCGGA TCGGAGTCTG CAACTCGACT
CCGTGAAGTC GGAATCGCTA GTAATCGTAG ATCAGAATGC TACGGTGAAT ACGTTCCCGG
GCCTTGTACA CACCGCCCGT CACACCATGG GAGTGGGCTG CACCAGAAGT AGATAGCTTA
ACCTTTCGGG GAGGGCGTTT ACCACGGTGT GGTTCATGAC TGGGGTGAAG TCGTAACAAG
GTAGCCCTAG GGGAACCTGG GGCTGGATCA CCTCCTT
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| Protein sequence | |
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