| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_R0050 |
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| Symbol | |
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| ID | 5610664 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2146027 |
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| End bp | 2147561 |
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| Gene Length | 1535 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640932654 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000278151 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC
GGAAACGGAG ATAGCTTGCT ATCAGACGTC GAGCGGCGGA CGGGTGAGTA ATGCCTAGAT
ATCTGCCTAG TCGTGGGGGA TAACAGTTGG AAACGACTGC TAATACCGCA TACGCCCTAC
GGGGGAAAGG AGGGGACCTT CGGGCCTTTC GCGATTAGAT GAGTCTAGGT GGGATTAGCT
AGTAGGTGAG GTAATGGCTC ACCTAGGCGA CGATCCCTAG CTGTTCTGAG AGGATGATCA
GCCACACTGG GACTGAGACA CGGCCCAGAC TCCTACGGGA GGCAGCAGTG GGGAATATTG
CACAATGGGC GAAAGCCTGA TGCAGCCATG CCGCGTGTGT GAAGAAGGCC TTCGGGTTGT
AAAGCACTTT CAGCGAGGAG GAAAGGTTGG CAGTTAATAA CTGTCAGCTG TGACGTTACT
CGCAGAAGAA GCACCGGCTA ACTTCGTGCC AGCAGCCGCG GTAATACGAG GGGTGCAAGC
GTTAATCGGA ATTACTGGGC GTAAAGCGTA CGCAGGCGGT TTGTTAAGCC AGATGTGAAA
GCCCCGGGCT CAACCTGGGA ATTGCATTTG GAACTGGCAA ACTAGAGTCT TGTAGAGGGG
GGTAGAATTT CAGGTGTAGC GGTGAAATGC GTAGAGATCT GAAGGAATAC CGGTGGCGAA
GGCGGCCCCC TGGACAAAGA CTGACGCTCA TGTACGAAAG CGTGGGGAGC AAACAGGATT
AGATACCCTG GTAGTCCACG CCGTAAACGA TGTCTACTCG GAGTTTGGTA ACTTAGTTAC
TGGGCTCCCA AGCTAACGCA TTAAGTAGAC CGCCTGGGGA GTACGGCCGC AAGGTTAAAA
CTCAAATGAA TTGACGGGGG CCCGCACAAG CGGTGGAGCA TGTGGTTTAA TTCGATGCAA
CGCGAAGAAC CTTACCTACT CTTGACATCC AGAGAATTCG CTAGAGATAG CTTAGTGCCT
TCGGGAGCTC TGAGACAGGT GCTGCATGGC TGTCGTCAGC TCGTGTTGTG AAATGTTGGG
TTAAGTCCCG CAACGAGCGC AACCCTTATC CTTATTTGCC AGCACGTAAT GGTGGGAACT
TTAGGGAGAC TGCCGGTGAT AAACCGGAGG AAGGTGGGGA CGACGTCAAG TCATCATGGC
CCTTACGAGT AGGGCTACAC ACGTGCTACA ATGGTCGGTA CAGAGGGTTG CAAAGCCGCG
AGGTGGAGCT AATCCCACAA AGCCGGTCGT AGTCCGGATC GGAGTCTGCA ACTCGACTCC
GTGAAGTCGG AATCGCTAGT AATCGTAGAT CAGAATGCTA CGGTGAATAC GTTCCCGGGC
CTTGTACACA CCGCCCGTCA CACCATGGGA GTGGGCTGCA CCAGAAGTAG ATAGCTTAAC
CTTTCGGGGA GGGCGTTTAC CACGGTGTGG TTCATGACTG GGGTGAAGTC GTAACAAGGT
AGCCCTAGGG GAACCTGGGG CTGGATCACC TCCTT
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| Protein sequence | |
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