| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4490 |
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| Symbol | |
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| ID | 5612566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5494797 |
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| End bp | 5495267 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935467 |
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| Product | F0F1 ATP synthase subunit B |
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| Protein accession | YP_001476220 |
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| Protein GI | 157377620 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0711] F0F1-type ATP synthase, subunit b |
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| TIGRFAM ID | [TIGR01144] ATP synthase, F0 subunit b |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00698245 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000569533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAATATCA ACGCTACCCT ACTCGGTCAG ACGGTTGCCT TTATTATCTT CGTGTGGTTC
TGCATGAAGT TTGTTTGGCC CCCTTTGATG AATGCCATCG AAGAGCGTCA AAAAAGGATT
GCCGACGGTC TAGCTGACGC TGACCGTGCC GTAAAAGACC TGGAGTTGGC TCAGTCTAAA
GCAACTGACC AACTAAAAGA CGCCAAAGCT ACTGCTAACG AGATCATTGA GCAAGCGAAC
AAACGTAAAG CTCAGATCGT CGATGAAGCA AAAGCCGAAG CAGATGCTGA GCGCGCTAAA
ATTATCGCTC AGGGTCAAGC AGAAATTGAA GCTGAACGTA ATCGCGTTAA AGAAGACTTG
CGTAAGCAAG TTGCTACTCT TGCCATTTAT GGTGCTGAGA AGATTCTTGA GCGTTCTATC
GATGAAGCCG CCCACAGTGA CATAGTTAAT AAACTTGTTG CTGAACTTTA A
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| Protein sequence | MNINATLLGQ TVAFIIFVWF CMKFVWPPLM NAIEERQKRI ADGLADADRA VKDLELAQSK
ATDQLKDAKA TANEIIEQAN KRKAQIVDEA KAEADAERAK IIAQGQAEIE AERNRVKEDL
RKQVATLAIY GAEKILERSI DEAAHSDIVN KLVAEL
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