| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4467 |
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| Symbol | gpsA |
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| ID | 5613005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5456396 |
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| End bp | 5457412 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935437 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001476197 |
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| Protein GI | 157377597 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.019291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA CTGCCGACAT TACGGTACTG GGGGCGGGGT CTTATGGCAC CGCCCTTGCT
ATTTCTCTAG CCAGTAACGG ACATAGAACA CTTCTTTGGG GGCATGAGCC CGAGCACATT
GCGAACCTAA AGAAAGACAA GTGTAACAAT GAGTTTTTGC CCGGTATTGC ACTCCCCGAC
CTTCTCATTC CGGAAGCTGA TTTAGCGACT GCGCTCGCGG CATCTAATAA TGTGTTGGTC
GTCGTTCCCA GCCATGTATT TGGTTCGGTT CTATCGCAAG CTAAGCCGCT ACTGCGTGAT
GATGCTCGAA TTATCTGGGC AACCAAGGGG CTTGAACCCG AAACCGGACG TCTTCTCCAG
GAAGTCGCCC GGGATATTCT AGGTGAGCAC TATCCACTCG CCGTATTATC CGGACCCACT
TTTGCCAAAG AGCTTGCCGC TGGTTTGCCT ACCGCAATTT CAATTGCCGG CACCGACGTG
AACTTTATCA AAGACTTGGT CGAGTTGCTT CACAGTCCTA AACGTCTACG TGTTTATGAA
AATGATGACT TTACCGGATT ACAATTAGGT GGTGCGGTTA AGAATGTGAT TGCTATCAGT
GCGGGAATGT CAGACGGAAT CGGATTCGGG GCTAATGCAA GAACGGCTCT GATCACCCGT
GGATTGGTCG AACTGACACG TCTAGGCGAA GCTATTGGTG CTCAAGGTGC AACCTTTATG
GGGATGGCCG GACTCGGCGA TCTCGTTCTG ACCTGTACCG ATAACCAATC TCGTAACCGT
CGTTTCGGAT TAGCGTTGGG GAAAGGCCTC GATGTTGAAA CCGCACAACA AGAGATTGGT
CAGGTAGTTG AAGGTTATCG TAATACCAAA GAAGTTTACA CATTAGCTAA ACGCCTTGGT
GTTGAGATGC CAATTACCGA ACAGGTCTAC AAAGTGCTTT ATCAGGGGGG GACTCCTCAT
GAAGCGGCTA AAGCCTTGTT AGGGCGTGAT CAGAAGTCTG AAACTCCAGA CAGCTAA
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| Protein sequence | MKNTADITVL GAGSYGTALA ISLASNGHRT LLWGHEPEHI ANLKKDKCNN EFLPGIALPD
LLIPEADLAT ALAASNNVLV VVPSHVFGSV LSQAKPLLRD DARIIWATKG LEPETGRLLQ
EVARDILGEH YPLAVLSGPT FAKELAAGLP TAISIAGTDV NFIKDLVELL HSPKRLRVYE
NDDFTGLQLG GAVKNVIAIS AGMSDGIGFG ANARTALITR GLVELTRLGE AIGAQGATFM
GMAGLGDLVL TCTDNQSRNR RFGLALGKGL DVETAQQEIG QVVEGYRNTK EVYTLAKRLG
VEMPITEQVY KVLYQGGTPH EAAKALLGRD QKSETPDS
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