| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4457 |
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| Symbol | |
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| ID | 5613441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5444674 |
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| End bp | 5444931 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935427 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476187 |
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| Protein GI | 157377587 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2388] Predicted acetyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.919934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTATGA ATACAAATGA CATTGAGATC ATTCACCTCA TCGATGAACA TGAGTTTGTT
ATTAATGTAG GACAAGCACA AGCTAGCCTC TCCTATGAGC TTTTTGACGG CAGGGTTAAC
TTTACTCACA CCTTCGTGCC CACAGAACTC AGGAATAAGG GCTTAGCCGA GAAGCTGGTC
CGCCATGGAC TAAGCTGGGC CAACTCGGAG CAACTCATCA TCGAGACAAG CTGCTGGTAC
GTACAGAAGT TTTTATGA
|
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| Protein sequence | MLMNTNDIEI IHLIDEHEFV INVGQAQASL SYELFDGRVN FTHTFVPTEL RNKGLAEKLV
RHGLSWANSE QLIIETSCWY VQKFL
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