| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4456 |
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| Symbol | |
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| ID | 5613440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5444215 |
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| End bp | 5444649 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935426 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001476186 |
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| Protein GI | 157377586 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACGTT TTATCAGGGA GTACCCCATA CACACCGAAA TATCGGTAGC TTGGGGCGAG
ATGGATGCAC TGCAGCACGT GAATAATGTG GTTTACTTCC GCTATTTCGA AACCGCCCGT
ATCGATTTTT TTACTCAGAT AAACTTGCTC GCCGATCTTC AAAGCACTCA GGTCGGCCCG
GTGATCAGCG AAAACACAGC TCGCTACAAG CGTCCGGTCA CCTTCCCTGA CACCTTACTC
GTCGGTGTAT CCATCAGTGA CATCAAGCAA GACCGCTTTA TGATGCATTA CAGTGTCTAT
AGTCAGGCAC AACAAGCGGT GACCACCTTA GGCAGCTCGC AGGTGGTGAT GTTTAACTTT
AAAACCGGTA AGAAAGCAGA GCTGAAACCC GCACTCCTCG ATGCCCTCAA ATCCCATGAA
CTGGCGGATG CTTAA
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| Protein sequence | MERFIREYPI HTEISVAWGE MDALQHVNNV VYFRYFETAR IDFFTQINLL ADLQSTQVGP
VISENTARYK RPVTFPDTLL VGVSISDIKQ DRFMMHYSVY SQAQQAVTTL GSSQVVMFNF
KTGKKAELKP ALLDALKSHE LADA
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