| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4447 |
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| Symbol | |
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| ID | 5610913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5433402 |
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| End bp | 5435072 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640935417 |
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| Product | urocanate hydratase |
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| Protein accession | YP_001476177 |
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| Protein GI | 157377577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2987] Urocanate hydratase |
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| TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA GACACGACCC AAGCCGTCGC ATCATAGCGC CACACGGCAC AAAGTTAAGC
TGTAAGAGCT GGTTCACCGA AGCGCCTATG CGTATGTTGA TGAACAACCT GCATCCGGAT
GTTGCCGAAC GCCCGGAAGA CCTGGTGGTC TACGGTGGTA TCGGACGTGC GGCCCGTGAT
TGGGAGTGCT ATGACAAGAT AATCGAAGTG CTGCAGCGCC TCGAAGAGGA TGAAACCCTT
CTGGTTCAGT CGGGTAAACC CGTTGGTGTT TTCAAGACCC ACAGTAACGC ACCTCGCGTG
ATTATCGCCA ACTCTAACCT GGTGCCACAT TGGGCCAACT GGGAACACTT CAACGAGCTG
GATAAGAAAG GTTTGGCCAT GTATGGCCAG ATGACGGCGG GTTCTTGGAT CTATATTGGC
TCTCAAGGAA TCGTGCAGGG CACCTACGAG ACTTTTGCCG CCATGGCGAC AAAACATTTT
GGTGGTTCAT CTAAGGGTAA GTGGATCCTG ACCGGTGGCT TGGGTGGTAT GGGTGGTGCT
CAGCCGCTGG CCGGCACTAT GGCGGGTTAC TCAGTGTTGA CCTGTGAAGT GGATGAAACC
CGTATCGATT TCCGTCTGCG TACTAAGTAT GTGGATAAGA AAACAGACTC GCTCGATGAA
GCTCTGGCGA TGATCGATGA AGCGAACAAG AGTGGTAAAC CTGTCTCTGT GGGTCTGCTT
GCCAATGCTG CTGATGTGTT TGCCGAGTTG GTTGAACGCG GTGTAACCCC GGATGTGGTG
ACCGATCAGA CGTCGGCGCA CGATCCTTTG AATGGTTACC TGCCTCAGAA CTGGACACTC
GAATACGCCG CCGAGATGCG TAAGAAAGAT GAAGCGGCTG TGGTTAAGGC TGCGAAACAA
TCTATGGCGG TACAGGTCAG AGCCATGCTG GCTCTGCAAG CCGCAGGCGC TGCAACGACC
GATTACGGTA ACAATATCCG CCAGATGGCA TTCGAAGAGG GAGTCGAAAA TGCATTCGAT
TTCCCAGGTT TCGTACCTGC CTATGTGCGT CCGCTTTTCT GTGAAGGTAT AGGACCATTT
CGCTGGGTTG CACTATCCGG CGATCCTGAA GATATCTATA AGACAGATGC CAAGGTTAAA
GAGCTTATTC CTGATAATCC ACAGCTACAT AATTGGCTGG ATATGGCCCG TGAACGTATC
GCGTTCCAGG GACTGCCATC ACGTATCTGT TGGGTTGGCC TGAAAGACCG TGCTCGTTTG
GCCTTGGCCT TCAACGAAAT GGTTAAAAGT GGCGAGCTTT CGGCGCCGGT TGTCATCGGT
CGTGACCATC TGGACTCCGG CTCAGTTGCC AGCCCTAACC GTGAAACAGA ATCTATGCTC
GATGGCTCGG ATGCGGTTTC AGATTGGCCA TTGATGAATG CACTTCTGAA TACGGCCAGT
GGCGCAACTT GGGTATCACT GCACCATGGC GGTGGTGTGG GTATGGGCTT TAGCCAACAC
TCGGGTGTGG TTATTGTCGC AGACGGCAGT GATGAGGCTG CGGTTCGATT AGGCCGTGTG
CTATGGAATG ACCCAGCGAC AGGTGTGATG CGTCACGCCG ATGCCGGATA CGATATCGCT
AAGAAATGCG CAAAAGAGCA GAATTTAGAT CTGCCGATGC TGGAGAAGTA A
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| Protein sequence | MDKRHDPSRR IIAPHGTKLS CKSWFTEAPM RMLMNNLHPD VAERPEDLVV YGGIGRAARD
WECYDKIIEV LQRLEEDETL LVQSGKPVGV FKTHSNAPRV IIANSNLVPH WANWEHFNEL
DKKGLAMYGQ MTAGSWIYIG SQGIVQGTYE TFAAMATKHF GGSSKGKWIL TGGLGGMGGA
QPLAGTMAGY SVLTCEVDET RIDFRLRTKY VDKKTDSLDE ALAMIDEANK SGKPVSVGLL
ANAADVFAEL VERGVTPDVV TDQTSAHDPL NGYLPQNWTL EYAAEMRKKD EAAVVKAAKQ
SMAVQVRAML ALQAAGAATT DYGNNIRQMA FEEGVENAFD FPGFVPAYVR PLFCEGIGPF
RWVALSGDPE DIYKTDAKVK ELIPDNPQLH NWLDMARERI AFQGLPSRIC WVGLKDRARL
ALAFNEMVKS GELSAPVVIG RDHLDSGSVA SPNRETESML DGSDAVSDWP LMNALLNTAS
GATWVSLHHG GGVGMGFSQH SGVVIVADGS DEAAVRLGRV LWNDPATGVM RHADAGYDIA
KKCAKEQNLD LPMLEK
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