| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4401 |
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| Symbol | |
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| ID | 5610602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5379797 |
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| End bp | 5380321 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935371 |
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| Product | molybdenum cofactor biosynthesis protein B |
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| Protein accession | YP_001476131 |
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| Protein GI | 157377531 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0521] Molybdopterin biosynthesis enzymes |
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| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR02667] molybdenum cofactor biosynthesis protein B, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.109195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00152144 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGACACT GCACTAATAC CCAATTTGTA CCATTAAACA TCGCTGTGCT TACCTTGTCA
GATTCCCGTG ACTTTAGCCG GGATACCTCT GGACAGTTTC TTGAAGATAA CCTGATCGAG
GCTGGTCACA CACTTGTCGA CCGTAAGTTG ATAAAGGATG ATAAATACGA GATCCGCTCG
GTGTTGTCTC AATGGATAGC TTCGGACGAG GTGCAGGTCA TTATCACTAC CGGCGGGACC
GGATTTACCG TGCGTGATAA TACTCCTGAA GCGGTCAAGC CCCTGTTCGA TAGGGAGATA
GAGGGCTTTG GAGAGCTGTT TCGCCATGTT ACCTATACCG AATTAGGCAC ATCGACGGTG
CAGTCGAGAG CGCTGGGTGG TTTTGCTAAC CAGACCGCTA TTTTTTGCCT GCCTGGTTCG
ACCGGAGCTT GTCGTACCGG ATGGACAAAA ATAATCAAAG AACAGTTAGA TGCAACACAT
AGACCCTGTA ATTTTGTGAT GCATGTGAAA AAAATATCGG GTTAA
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| Protein sequence | MGHCTNTQFV PLNIAVLTLS DSRDFSRDTS GQFLEDNLIE AGHTLVDRKL IKDDKYEIRS
VLSQWIASDE VQVIITTGGT GFTVRDNTPE AVKPLFDREI EGFGELFRHV TYTELGTSTV
QSRALGGFAN QTAIFCLPGS TGACRTGWTK IIKEQLDATH RPCNFVMHVK KISG
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